Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., valyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  105 bits (261), Expect = 2e-26
 Identities = 106/443 (23%), Positives = 173/443 (39%), Gaps = 66/443 (14%)

Query: 413 RHKTPIIFRATPQWFVSMEQAGLREQALTAIKG--VHWMPDWGQSRIEGMVAGRPEWCIS 470
           R K  I    T QWFV  EQ  +   AL A++   V  +P+ G+      +     WCIS
Sbjct: 440 RSKVVIEPMLTDQWFVDAEQ--IVGPALDAVRNGTVKILPESGEKTYYHWLDNIEPWCIS 497

Query: 471 RQRTWGVPIALFVHKETAELHP------NSADLIEKVAQLVEQK-----GIQAWWDLDTA 519
           RQ  WG  I ++      E++       + A+ +  VA  V++      G  A  D D  
Sbjct: 498 RQLWWGHQIPVWYGPRRVEVNGVETLDFDPANAVHFVAHSVDEARAKAAGYYALPDADKV 557

Query: 520 ELL-------------------------------GAEDAANYEKVLDTLDVWFDSGVTHS 548
            ++                                  DA    +  D LD WF SG+   
Sbjct: 558 IIVRSFPRGTPGSGPTDGRVDPMTDAVAAAQRAEAVPDAIPLVQDPDVLDTWFSSGLWPI 617

Query: 549 AVV----DARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVVDG 604
             +    D  +          + G D    W    ++  +A+ G+ P++EV  HG V D 
Sbjct: 618 GTLGWPEDTEELRKYFPTSTLVTGQDILFFWVARMMMMQLAVTGEVPFREVYLHGLVRDA 677

Query: 605 QGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR----R 660
           +G+KMSKS+GNVV P ++ ++ GAD LR   A+    G V   D  L+R    YR    +
Sbjct: 678 KGKKMSKSVGNVVDPLEIIDEYGADALRFSSAAMASLGGVLKLD--LQR-VQGYRNFGTK 734

Query: 661 IRNTARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQR 720
           + N  RF   N      T   +P      ++RW +G     ++ +  A  +Y  +     
Sbjct: 735 LWNATRFAEMNEVFTAHTQSAMPPGCTETVNRWIIGETAKVREAVDTALAEYKFNDAANA 794

Query: 721 LMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEI 780
           L  F   ++  +Y++  K           A+   +  + ++++     + PIM F  +E+
Sbjct: 795 LYAFVWGKVCDWYVEFAKPLLLDGDDATKAE--TRAVMAWVLDQCFILLHPIMPFITEEL 852

Query: 781 WNAMPAQQADGSARDKFVFTTEW 803
           W            RDK +   +W
Sbjct: 853 WGTT-------GQRDKMLVHADW 868



 Score = 76.6 bits (187), Expect = 8e-18
 Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 22/198 (11%)

Query: 22  AKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKS 81
           A+ EP +  RW  E  + A   A + + +F +   PP   G +H+GHA N  L+D++I+ 
Sbjct: 10  AEAEPRLYARWEAEGCFAAGANASRDE-TFCVMIPPPNVTGSLHMGHAFNNTLQDILIRW 68

Query: 82  KTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREKC-------REYAAGQV 134
           K + G+D  + PG D  G+  +++ E+++   G+   A   R K        +  + G +
Sbjct: 69  KRMQGYDTLWQPGTDHAGIATQMVTEREMAANGEPTRAEMGRAKFLARVWEQKVKSRGTI 128

Query: 135 EGQKESFKRLGILGEWDKPYRTM---DFVTEAN--------IIRALGKIADNGHLLKGFK 183
            GQ    KR+G   +W +   TM   D   E          +I+    + D G + +G +
Sbjct: 129 IGQ---LKRIGASCDWSREAFTMGGADGDPEKGNGPNFHDAVIKVFVDMYDKGLIYRGKR 185

Query: 184 PVHWCTDCGSALAEAEVE 201
            V+W     +A+++ EVE
Sbjct: 186 LVNWDPHFETAISDLEVE 203