Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 991 a.a., isoleucyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  663 bits (1710), Expect = 0.0
 Identities = 381/992 (38%), Positives = 537/992 (54%), Gaps = 73/992 (7%)

Query: 2   SEYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKG--KKSFVLHDGPPY 59
           ++YKDTLNLP+T FPMR  L KREPE L RW +  +Y  +R+  K   + +F LHDGPPY
Sbjct: 9   NQYKDTLNLPKTDFPMRAGLPKREPEWLARWEEMGIYDRLREKAKAETRPAFTLHDGPPY 68

Query: 60  ANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKV---GKPGQK 116
           ANG++HIGHALNKILKD++++S+ + G DA YIPGWDCHGLPIE  +E+K    G+   +
Sbjct: 69  ANGNLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKIEEKYRAKGRDKDE 128

Query: 117 VTAAEFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNG 176
           +   +FR++CR +A G V+ Q+E FKRLG+ G W+KPY TMDF  E  I     K    G
Sbjct: 129 IPVIDFRQECRTFAEGWVDVQREEFKRLGVTGNWEKPYLTMDFHAERVIAEEFMKFLMTG 188

Query: 177 HLLKGFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKG 236
            L +G KPV W     +ALAEAEVEY ++ + +I V+F         +       H G G
Sbjct: 189 TLYQGSKPVMWSPVEKTALAEAEVEYHDRQTDAIWVKFPITKARVGESPVDEPDDHMGAG 248

Query: 237 ---------DVSIVIWTTTPWTLPANRAVCLRADLEYVLIQVEGEQPE-------RIIVA 280
                    + +++IWTTTPWT+P NRA+C    + Y L ++     E         I+A
Sbjct: 249 AQLLAEQLEESAVIIWTTTPWTIPQNRAICFGEGISYGLYEITATPEECWASVGDTYIMA 308

Query: 281 SELAKSVMDRAGIEHFHNLGFATGADLELVQFQHPF---------YSFTVPAILGDHVTT 331
             LA++ + +A +E F      T  +L  V   HPF         + F VP + GDHVT 
Sbjct: 309 DALAEAALTQARVEGFTRRRDVTAGELSRVTCAHPFAGAEGAGGEWDFDVPLLAGDHVTD 368

Query: 332 DSGTGVVHTAPGHGQEDFAVGQQYGLEVANPVGSNGVYLPDTELFAGQHVFK-------A 384
           D+GTG VHTAP HG +D+A+G ++GL +   V  +  Y  D   F G+ + K       A
Sbjct: 369 DAGTGFVHTAPSHGDDDYAIGVKHGLPMTYNVLDDSSYRADLPFFGGECILKPNGKPGGA 428

Query: 385 NDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMEQA----------G 434
           N +V+  L E   LL       S  H WR K P+I    PQWF ++++            
Sbjct: 429 NKAVIAKLVELDRLLARQRITISDAHSWRSKAPVIRLNRPQWFAAIDKPVGDGNDTYGET 488

Query: 435 LREQALTAIKG-VHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPIALFVHKETAELHPN 493
           +R++ALT+I   V W P  G++R+  M+  RP+W +SRQR WGVP+  FV K      P+
Sbjct: 489 IRQRALTSIDQLVTWTPQTGRNRLYSMIEARPDWVLSRQRAWGVPLTCFVKKGAQPADPD 548

Query: 494 ----SADLIEKVAQLVEQKGIQAWW-DLDTAELLGAE-DAANYEKVLDTLDVWFDSGVTH 547
                  +  ++ +  E +G  +W+ +   A  LG E D   YE+V D LDVWFDSG TH
Sbjct: 549 YLLRDPAVNARIVEAFENEGADSWYAEGAKARFLGNEHDPEAYEQVFDILDVWFDSGSTH 608

Query: 548 SAVVDARQEFNGAE---ADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVVDG 604
           + V+  R++  G+E   AD+YLEG+DQHRGWF SS++ +    G+APY+ VLTHGF +D 
Sbjct: 609 AFVLRDRED--GSEDGLADLYLEGTDQHRGWFHSSMLQACGTMGRAPYRGVLTHGFTLDA 666

Query: 605 QGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNT 664
           +G KMSKS+GN VAP+ V  + GADILRLWVA +DYT ++ + DEILK  AD+YRR+RNT
Sbjct: 667 KGNKMSKSVGNTVAPEKVVQQYGADILRLWVAQSDYTVDLRIGDEILKNVADSYRRLRNT 726

Query: 665 ARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQRLMNF 724
            R+ L  L+ F     + P E M  ++R  +       + +   Y  Y+   V Q + +F
Sbjct: 727 MRYLLGALSAFEEADRVAP-EQMPEMERVILHMMADLDERVRAGYAAYDFQGVFQSVFHF 785

Query: 725 CSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEIW-NA 783
            ++ + + Y D+ KD  Y  K     +R+  T +  I   L  W+API+ FT +E+W   
Sbjct: 786 ATVTLSAQYFDIRKDALYCDKPDSLRRRAALTVMDAIFHRLTAWLAPILVFTCEEVWLER 845

Query: 784 MPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWNDIQKVRGSVNKLLENARNEKL 843
            P   +    +D      +W          E +    W  I+ VR  V   LE  R  K 
Sbjct: 846 FPGPDSSIHLQDFPAPRPDW-------RHPEAVGR--WEVIRGVRRVVTGGLELERQAKT 896

Query: 844 IGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKPLAEKSEAAQATDIDGLFVQ 903
           IG SL+A   +     +A  +    +      + S+  V        A    D+ G+ + 
Sbjct: 897 IGASLEAAPTVHVPAHVAGMIDP--ELFADTCIVSQLTVSTDPVPEGAFTLPDVPGVGMV 954

Query: 904 VNKTEAEKCDRCWHHTPDVGTIAGHTTICGRC 935
             + E EKC RCW   PDVGT A H   C RC
Sbjct: 955 FARAEGEKCQRCWKILPDVGTHA-HPGTCARC 985