Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 969 a.a., isoleucyl-tRNA synthetase from Caulobacter crescentus NA1000

 Score =  715 bits (1846), Expect = 0.0
 Identities = 403/970 (41%), Positives = 555/970 (57%), Gaps = 81/970 (8%)

Query: 3   EYKDTLNLPETGFPMRGDLAKREPEMLQRWY---QEDLYGAIRQAKK--GKKSFVLHDGP 57
           +Y++T+ LP+T FPMR  L K+EPE+L+ W    ++ LYGA+RQ ++  G   FV HDGP
Sbjct: 10  DYRETVFLPDTPFPMRAGLPKKEPEILEGWAALSEKGLYGAVRQKRQAAGAPLFVFHDGP 69

Query: 58  PYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK- 116
           PYANG IHIGHALNKILKD +++S+   G+D  Y+PGWDCHGLPIE  +E++    G++ 
Sbjct: 70  PYANGAIHIGHALNKILKDFVVRSRFALGYDVDYVPGWDCHGLPIEWKIEEQFRAKGRRK 129

Query: 117 --VTAAEFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIAD 174
             V A EFR +CR YA G +E QK  F+RLG+LG+W   Y TMDF +EA I+    K   
Sbjct: 130 DEVPAEEFRRECRAYAGGWIEAQKTEFQRLGVLGDWWNRYATMDFTSEAKIVEEFHKFLA 189

Query: 175 NGHLLKGFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAAD--EAAVLAKFGLAAGH 232
            G L +G KPV W     +ALA+AE+EY + VSP+I V+F      +AAV AK       
Sbjct: 190 TGQLYRGSKPVMWSPVERTALADAEIEYHDHVSPTIWVKFPVVQGSDAAVGAK------- 242

Query: 233 EGKGDVSIVIWTTTPWTLPANRAVCLRADLEYVLIQV----EGEQPE-------RIIVAS 281
                  +VIWTTTPWT+PANRAV    D+ Y + +V    EG + E       R+I+A 
Sbjct: 243 -------LVIWTTTPWTIPANRAVSYNPDIPYSVFEVTALEEGLEFEPWAKPGDRLIIAD 295

Query: 282 ELAKSVMDRAGIEHFHNLGFATGADLELVQFQHPF------YSFTVPAILGDHVTTDSGT 335
           +LA+ V   A +  +  +      D E +   HP       Y + VP + GDHVT D+GT
Sbjct: 296 KLAEDVFKAAKVASWKTV---EAVDCEGMVLAHPLADLDSHYGYAVPMLAGDHVTDDAGT 352

Query: 336 GVVHTAPGHGQEDFAVGQQYG-LEVANPVGSNGVYLPDTELFAGQHVFK----------- 383
           G VHTAPGHG +D+ V   +G  E+ + V  +G Y P   LFAG  V +           
Sbjct: 353 GFVHTAPGHGADDYQVWLAHGHREIPDTVDPDGAYYPHVALFAGLKVLETEGKKVGKFGP 412

Query: 384 ANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMEQA-------GLR 436
           AN +V+E L E G LL     EHSYPH WR K P+IFR TPQWF+ M+ A        LR
Sbjct: 413 ANGAVMEKLIEAGNLLARGRVEHSYPHSWRSKAPVIFRNTPQWFIRMDHAVDSLDGKTLR 472

Query: 437 EQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPIALFVHKETAELHP-NSA 495
           E A+ AI    + PD G++RI  MV  RP+W ISRQR WG P+A+FV K T   HP N  
Sbjct: 473 EVAVQAIADTAFYPDGGRNRIGAMVETRPDWLISRQRNWGTPLAMFVDKHTG--HPLNDP 530

Query: 496 DLIEKVAQLVEQKGIQAWWDLDTAELLGAEDAANYEKVLDTLDVWFDSGVTHSAVVDARQ 555
           ++  ++   + + G  AW+    A+ LGA D A YEK+ D LDVWFDSG TH+  ++ R 
Sbjct: 531 EVNARILAAIREGGADAWFTRPDADFLGAHDPAQYEKITDILDVWFDSGCTHAFTIEGRA 590

Query: 556 EFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGN 615
           + +   AD+YLEGSDQHRGWFQSSL+     +G+APYK V+THGF +D  G KMSKS GN
Sbjct: 591 D-SAWPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPYKAVVTHGFTMDENGEKMSKSRGN 649

Query: 616 VVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTARFFLANLNGF 675
            + PQ +T + GA+ILRLW A  DY  +  +   IL  + DAYR++RNT R+ L  L GF
Sbjct: 650 TIEPQTITKESGAEILRLWTAMVDYQEDQRIGKTILATTTDAYRKLRNTMRYLLGALAGF 709

Query: 676 NPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQRLMNFCSIEMGSFYLD 735
           +    +   +   AL+++ + R      ++ +AYQ Y    V++ L+ FC  ++ + Y D
Sbjct: 710 DEEERVTDYDQFPALEKYILHRLWELDGQVREAYQSYRFSDVIRPLIEFCQGDLSALYFD 769

Query: 736 VIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEIWNAMPAQQADGSARD 795
           V +D  Y  +     +R+ +TAL ++ + L  W+AP+ SFT +E W     +    + R 
Sbjct: 770 VRRDSLYCDRPDALKRRAYRTALDYVFDRLTIWLAPLASFTMEEAWTTRFPEAGPVAYRV 829

Query: 796 KFVFTTEWFDGLFGLAEGEELNNAFWNDIQKVRGSVNKLLENARNEKLIGGSLQ-AELVL 854
                  W           +   A W  ++KV   V   LE  R EK IG +L+ A +V 
Sbjct: 830 MPERVDAW---------RNDAEAARWAKVEKVTSVVTGALEVERREKRIGSALEAAPVVH 880

Query: 855 FADDSLASKLAKLGDELRFVLLTSKAVVKPLAEKSEAAQATDIDGLFVQVNKTEAEKCDR 914
           FAD+ L +  A  G +   V  TS A +  +A  + A +  ++ G+ V  NK E +KC R
Sbjct: 881 FADEDLLA--AFEGLDAGEVFRTSSATL--VAGDAGAFRVDEVKGVSVDPNKAEGKKCAR 936

Query: 915 CWHHTPDVGT 924
            W   P+VGT
Sbjct: 937 SWRILPEVGT 946