Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., valyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  187 bits (474), Expect = 3e-51
 Identities = 175/773 (22%), Positives = 312/773 (40%), Gaps = 92/773 (11%)

Query: 31  RWYQEDLYGAIRQAKK-GKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDA 89
           +WYQ  L   +  +K  G++ + +   PP   G +H+GH LN  ++D++++   + G +A
Sbjct: 15  KWYQYWLEHRLFSSKPDGREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNA 74

Query: 90  PYIPGWDCHGLPIELMVEKKVGKPGQK---VTAAEFREKCREYAAGQVEGQKESFKRLGI 146
            ++PG D   +  E  V  K+   G K   +T  EF +   ++         +  ++LG 
Sbjct: 75  CWVPGTDHASIATEAKVVNKLAAQGIKKTDLTRDEFLKHAWDWTEEHGGIILKQLRKLGA 134

Query: 147 LGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGFKPVHWCTDCGSALAEAEVEYKNKV 206
             +WD+   TMD     ++++    + + G + +G + V+W     +AL++ EV YK + 
Sbjct: 135 SCDWDRTAFTMDEERSKSVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194

Query: 207 SPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIVIWTTTPWTLPANRAVCLRADLEYVL 266
                +R+K   +             EG+     V+ TT P T+  + A+C+  + +   
Sbjct: 195 GKLFYLRYKVEGDP------------EGR---YAVVATTRPETIMGDTAMCINPN-DPKN 238

Query: 267 IQVEGEQPERIIVASELAKSVMDRAGIEHFHNLGFATGADLELVQFQHPFYSFTVPAILG 326
             ++G+   ++IV                                   P  +  +P I  
Sbjct: 239 AWLKGK---KVIV-----------------------------------PLVNRVIPVIED 260

Query: 327 DHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEVANPVGSNGVYLPDTELFAGQHVFKAND 386
           D+V  + GTG +   P H   D+ +G++Y L   +    NG       L+ G   F    
Sbjct: 261 DYVDIEFGTGCLKVTPAHDVNDYMLGEKYNLPSIDIFNDNGTLSEAAGLYIGMDRFDVRK 320

Query: 387 SVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMEQAGLREQALTAIKG- 445
            + + L   G L    AY +   +  R    I  + + QWF+ M+     + AL  +   
Sbjct: 321 QIEKDLDAAGLLEKTEAYTNKVGYSERTNVVIEPKLSMQWFLKMQH--FADMALPPVMND 378

Query: 446 -VHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPIALFVHKETAELHPNSADLIEKVAQL 504
            + + P   ++     +    +WCISRQ  WG  I  +   E    +  +A   E +A+ 
Sbjct: 379 ELKFYPAKYKNTYRHWMENIKDWCISRQLWWGHRIPAYFLPEGG--YVVAATPEEALAKA 436

Query: 505 VEQKGIQAWWDLDTAELLGAEDAANYEKVLDTLDVWFDSGVTHSAVVDARQEFNGAEADM 564
            E+ G  A         L  +D    E   D LD WF S +   ++ D        E   
Sbjct: 437 KEKTGNAA---------LTMDDLRQDE---DCLDTWFSSWLWPISLFDGINHPGNEEISY 484

Query: 565 YLEGSDQHRG------WFQSSLISSVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVA 618
           Y   SD   G      W    ++     +GK P+K V   G V D  GRKMSKS+GN   
Sbjct: 485 YYPTSDLVTGPDIIFFWVARMIMVGYEYEGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPD 544

Query: 619 PQDVTNKLGADILRLWVASTDYTG-EVAVSDEILKRSADAYRRIRNTARFFLANLNGFNP 677
           P ++ +K GAD +R+ +      G ++   D + ++  +   +I N  R     + G+  
Sbjct: 545 PLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRNFCSKIWNAFRL----IKGWTV 600

Query: 678 TTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVI 737
             +I   +       W   +      E+   +  Y L   +  +      E  S+YL++I
Sbjct: 601 DDNIQASDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMAVYKLFWDEFSSWYLEMI 660

Query: 738 KDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEIWNAMPAQQAD 790
           K        G    R+  +A    ++ L+  + P M F  +E+W  M  + A+
Sbjct: 661 KPAY-----GQGIDRTTYSATLCFLDNLLHLLHPFMPFITEELWQQMYERNAE 708