Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 1162 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  254 bits (649), Expect = 2e-71
 Identities = 217/892 (24%), Positives = 377/892 (42%), Gaps = 147/892 (16%)

Query: 20  DLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVII 79
           DL++   ++L++W +  ++      + G  SFV  +GPP ANG   I H + + +KD+  
Sbjct: 12  DLSQVNKDVLKKWDENQVFAKSMTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFC 71

Query: 80  KSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKP----GQKVTAAEFREKCREYAAGQVE 135
           + KT+ G+      GWD HGLP+EL VEK +G      G+K++ A++   CR+      +
Sbjct: 72  RYKTMKGYQVKRKAGWDTHGLPVELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTK 131

Query: 136 GQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGFKPVHWCTDCGSAL 195
             ++   ++G   +   PY T D      +   L ++   G L KG+    +    G+ L
Sbjct: 132 EWEDLTHQMGYWVDMKHPYITYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGL 191

Query: 196 AEAEVE----YKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIVIWTTTPWTLP 251
           +  E+     Y++    +   +FK  +    +A++G             + WTTTPWTLP
Sbjct: 192 SSHELNQPGCYRDVKDTTAVAQFKMKNPKPEMAEWGTPY---------FLAWTTTPWTLP 242

Query: 252 ANRAVCLRADLEYVLIQVEGE---QPERIIVASELAKSVMD-----------RAG--IEH 295
           +N A+C+   ++YV +Q       +P  +++A  L  +  +           +AG  +  
Sbjct: 243 SNTALCVGPKIDYVAVQTYNAYTGEPITVVLAKALLNTHFNSKAADLKLEDYKAGDKLVP 302

Query: 296 FHNLGFATGADL------ELVQFQHPFY------------SFTVPAILGDHVTTDSGTGV 337
           F  +    GADL      +L+ +  P               F V  I GD+VTT+ GTG+
Sbjct: 303 FKVVAEYKGADLIGMEYEQLIPWVKPVEVSEDGTWKVSGKGFRV--IPGDYVTTEDGTGI 360

Query: 338 VHTAPGHGQEDFAVGQQYGLEVANPVGSNGVYLPDTEL---------------------- 375
           VH AP  G +D  V +  G+     +   G   P  +L                      
Sbjct: 361 VHIAPTFGADDANVARAAGIPSLFMINKKGETRPMVDLTGKFYMLDELDENFVKECVDVD 420

Query: 376 ----FAGQHVFKANDSVLEV----------------------LKEKGALLHHHAYEHSYP 409
               + G  V  A + V  V                      +K          + H+YP
Sbjct: 421 KYKEYQGAWVKNAYNPVFMVDGKYDEKAAQAAESLDVALCMMMKANNQAFKIEKHIHNYP 480

Query: 410 HCWRHKTPIIFRATPQWFVSMEQAGLREQALTAIKGVHWMPD-WGQSRIEGMVAGRPEWC 468
           HCWR   P+++     WF+       +E+ +   K ++W P+  G  R    +    +W 
Sbjct: 481 HCWRTDKPVLYYPLDSWFI--RSTACKERMMELNKTINWKPESTGTGRFGKWLENLNDWN 538

Query: 469 ISRQRTWGVPIALFVHKE-TAELHPNSA-DLIEKVAQLVEQKGIQAWWDLDTAELLGAED 526
           +SR R WG P+ ++  ++ T+E+   S  +L  ++ + V    +++    D   + G   
Sbjct: 539 LSRSRYWGTPLPIWRTEDGTSEICIESVEELYNEIEKSVAAGFMKSNPYKDKGFVPGEYT 598

Query: 527 AANYEKV-----------------------LDTLDVWFDSGVTHSA----------VVDA 553
             NY+K+                        D +DVWFDSG    A          ++D 
Sbjct: 599 EGNYDKIDLHRPYVDDIILVSEDGQPMKRESDLIDVWFDSGAMPYAQIHYPFENKNILDN 658

Query: 554 RQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHGFVVDGQGRKMSKSI 613
           R+ +    AD   EG DQ RGWF +    +  +     YK V+++G V+D  G KMSK +
Sbjct: 659 REVY---PADFIAEGVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNKMSKRL 715

Query: 614 GNVVAPQDVTNKLGADILRLWVA--STDYTGEVAVSDEILKRSADAYRRIRNTARFF--L 669
            N V P     K G+D LR ++   S+ +       D I +     +  + NT  FF   
Sbjct: 716 NNAVDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDIDGIEEVRRKFFGTLYNTYSFFALY 775

Query: 670 ANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQRLMNFCSIEM 729
           AN++GF      +P+ +   +DRW +       +E+   Y +Y      + + +F +  +
Sbjct: 776 ANVDGFEYKEADVPMAERPEIDRWILSVLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNL 835

Query: 730 GSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADEIW 781
            ++Y+ + + R +  +       + QT L+  +E + + MAPI  F AD ++
Sbjct: 836 SNWYVRLNRKRFWGGEFTQDKLSAYQT-LYTCLETVAKLMAPISPFYADRLY 886