Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., Proposed peptidoglycan lipid II flippase MurJ from Pseudomonas fluorescens FW300-N2E2

 Score =  394 bits (1013), Expect = e-114
 Identities = 215/510 (42%), Positives = 312/510 (61%), Gaps = 7/510 (1%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLKS   VS++T++SRVLG VRD ++A + GAG + D FF A ++PN LRR+FAEGAFSQ
Sbjct: 3   LLKSLAAVSSITMLSRVLGFVRDTLIARIFGAGMATDAFFIAFKLPNLLRRIFAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP+L EY +      TR  IA  +G L +++ +VT  G+L +  V      G F D  
Sbjct: 63  AFVPILAEYKSQKGDEATRTFIAYVTGLLTLVLALVTAAGMLAAPWVIWATAPG-FTD-- 119

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                  KF+L S LL++TFPY+  I+  +L+GAILNT  +F+V +F P  LNV MI+ A
Sbjct: 120 ----TPEKFQLTSDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVSMIVFA 175

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMIP 249
            +L+P  + P + L   V +GGL Q L+QLP L K G+LV P+   +D GV ++   M+P
Sbjct: 176 VFLTPYFDPPVMALGWAVLVGGLAQLLYQLPHLKKIGMLVLPRLNLRDSGVWRVMKQMLP 235

Query: 250 ALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKH 309
           A+ GVSVSQI+L+ ++  ASFL  GS+SW+YY+DRL+E P G+ G+A+ T++LP L++ +
Sbjct: 236 AILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPTLAKTY 295

Query: 310 VDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLL 369
                  ++  +DWG+R+   L +P  L L +LA+P+ + LF  G+F   D      +L+
Sbjct: 296 ASQDRQEYSRILDWGLRLCFVLVLPCSLALGILAEPLTVSLFQYGQFNAFDALMTQRALI 355

Query: 370 AYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATS 429
           AYS GLL  ++IKVLAPG+Y++Q+  TPV+  I  +V   + N +      + GLA+A S
Sbjct: 356 AYSVGLLGIIVIKVLAPGFYAQQNISTPVKIAIFTLVMTQLFNLLLIGPLAHAGLALAIS 415

Query: 430 MSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGIS 489
             A LN  LL+  L  Q +Y        F  +L +A AVM+  LL  +  M  W    + 
Sbjct: 416 AGACLNAGLLFYQLRKQKMYQPQPGWGKFGLKLLVAVAVMSAVLLGAMHFMPAWGEGQML 475

Query: 490 QRALTLTGLIGLGVASYLAILLLLGVRLKD 519
            R L L  L+  GV +Y  +LLL+G RL+D
Sbjct: 476 ARFLRLGALVVAGVVAYFGMLLLMGFRLRD 505