Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., Uncharacterized membrane protein, putative virulence factor from Pseudomonas stutzeri RCH2

 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 126/506 (24%), Positives = 214/506 (42%), Gaps = 39/506 (7%)

Query: 15  IIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQAFVPV 74
           +++ A+T+ S +LG +RD+ +A   G    AD+ F A  +P F    F   A   A +P 
Sbjct: 5   LVILALTVASFLLGFLRDLFIARSFGLSWEADLIFVALILPLFFEN-FLGLALRDALIPY 63

Query: 75  LTEYHASGDINKTRDLIAR-ASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLNGGP 133
           L +  +        + +AR     + +L   V L+ +L S  V      GW  + +  G 
Sbjct: 64  LQKLRSQSQ--SLFEAVARWLYWRIMLLGGAVCLVILLTSYWVLNALAPGWTPEQVANGQ 121

Query: 134 AAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCAWYLS 193
               F + +LL+ +          +   GA+LN    F +     + LN   I+      
Sbjct: 122 LV--FCVGALLIGVQ-------AALYCQGALLNMDNVFILPMTRTLLLNAGAIIGILLFE 172

Query: 194 PNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV-VKIRTLMIPALF 252
           P+      G+AI  FLG L+  L  +    +    +R +    + G   +      P L 
Sbjct: 173 PS------GMAI--FLGMLLPQLVLIVVQHRRIRYLRGEAQALEKGHGSQFGLAFAPVLL 224

Query: 253 GVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDA 312
                Q  +L +   ASFL+ GSI+ L ++ R++  PL L+ +++ +V+ P  S    D 
Sbjct: 225 AAGAQQACILAERMFASFLEEGSITMLSFAFRIVTIPLTLYAMSVLSVLFPQFSASWNDQ 284

Query: 313 HSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLLAYS 372
              G A  +  G+       +PA + L    + ++ VL  RGEF  +  +  +  ++ Y+
Sbjct: 285 DHTGHAAVIRKGLLATLLFLVPATVVLCSFPEAVVSVLLERGEFGAAQTQATASLMVIYA 344

Query: 373 SGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATSMSA 432
            GL +  L  +      ++   +  +   +I+    I L+A     YG  GLA+A S  A
Sbjct: 345 LGLPAMGLALLWGRALLAQHQVRLFLVITLISSAMTIGLDAALYRHYGAAGLALAFSSGA 404

Query: 433 FLNMALLYRGLHLQGVYHLTRKTVWFVARLA--MAGAVMTGALLWQLDTMATWLSWGISQ 490
            L    ++ GL    VY  + K    VA LA  +A AV+  A L  +             
Sbjct: 405 ALQ--AMFMGLF---VYRASPKGAG-VAVLARWLATAVVVAAALHFVPQ---------PH 449

Query: 491 RALTLTGLIGLGVASYLAILLLLGVR 516
             + L   IGL +A++ A + LLG R
Sbjct: 450 GLIELCLYIGLVLAAFAAGVTLLGER 475