Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Proposed peptidoglycan lipid II flippase MurJ from Xanthomonas campestris pv. campestris strain 8004

 Score =  390 bits (1002), Expect = e-113
 Identities = 219/539 (40%), Positives = 321/539 (59%), Gaps = 36/539 (6%)

Query: 9   RLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFS 68
           R+++  +  S+MT++SRVLGL+RD  ++   GA A  D F+ A RIPNFLRRLFAEG+F+
Sbjct: 5   RMMRGLLSFSSMTMVSRVLGLIRDQAISTTFGANAVTDAFWVAFRIPNFLRRLFAEGSFA 64

Query: 69  QAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDW 128
            AFVPV TE   +      R+L+AR SGTLG ++ +VT +G++ +  + ++F  G   D 
Sbjct: 65  TAFVPVFTEVKETRPHADLRELMARVSGTLGGMLLLVTALGLIFTPQLASVFSDGAATD- 123

Query: 129 LNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILC 188
                   K+ L   LL++TFP+L F++  AL+G  LN+  +FA+ + TPV LN+ MI  
Sbjct: 124 ------PDKYGLLVDLLRLTFPFLLFVSLTALAGGALNSFQRFAIPALTPVILNLCMIAG 177

Query: 189 AWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMI 248
           A +L+P L+ P + L   V + G +Q LFQLP L    +L  P+WGW+ P V K+ TLMI
Sbjct: 178 ALWLAPRLDVPILALGWAVLVAGALQLLFQLPALKGIDLLTLPRWGWRHPDVRKVLTLMI 237

Query: 249 PALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRK 308
           P LFG SV+QINL+ D+ +A+ L  GS SWL  +DR LE PLG+FG+A+ TVILPAL+R 
Sbjct: 238 PTLFGSSVAQINLMLDTVIAARLSDGSQSWLSLADRFLELPLGVFGVALGTVILPALARH 297

Query: 309 HVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSL 368
           HV      F+  +DWG R    + +PAMLGL++LA+P++  LF   +FT  D    + S+
Sbjct: 298 HVKTDRTAFSGALDWGFRTTLLIAMPAMLGLLLLAEPLVATLFQYRQFTAFDTRMTALSV 357

Query: 369 LAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLN-AIFAWFYG------- 420
              S GL ++ ++KV+ P +Y+RQDT+TPVR G+ A+++N+V N A  A  Y        
Sbjct: 358 YGLSFGLPAYAMLKVVLPAFYARQDTRTPVRAGVAALIANMVFNFAFLAVLYQVMVPPEL 417

Query: 421 ---------------YVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMA 465
                          ++ L +A+++S++LN+ LL+  L   GVY        + ARL +A
Sbjct: 418 KEQGVMQALGKQPGLHLALGIASALSSYLNLGLLWFWLGKSGVYQRRPGWAGYAARLLVA 477

Query: 466 GAVMTG---ALLWQLDTMATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLK 521
            A M      LLW L +      W   QR   L  L+G G  +Y+   L LG+R + L+
Sbjct: 478 CAAMVVVLLGLLWWLPSFTDMDKW---QRIGWLAVLVGSGGLTYVVAQLALGLRPRHLR 533