Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., murein biosynthesis integral membrane protein MurJ from Synechocystis sp000284455 PCC 6803

 Score =  136 bits (343), Expect = 2e-36
 Identities = 146/541 (26%), Positives = 236/541 (43%), Gaps = 65/541 (12%)

Query: 7   SKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFA--E 64
           S+ L     IV+  TLIS+V GL+R+ ++A   G G     + +A  IP FL  L     
Sbjct: 8   SRSLANIAGIVAIATLISKVFGLLREQIIAAAFGVGTVVTAYAYAYVIPGFLFILLGGIN 67

Query: 65  GAFSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLI-GVLGSGAVTALFGAG 123
           G F  A V VL++          RD    A     ++ T+ TL+ GVL    +  + GAG
Sbjct: 68  GPFHSALVSVLSK----------RDREEAAP----LVETVTTLVSGVLLGVTIILVLGAG 113

Query: 124 WFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNV 183
            F+D L  G       +A   L+I  P       + +    LN   ++ + S +P+  ++
Sbjct: 114 IFIDLLAPGLEPETRRMAVQQLQIMAPMALLSGLIGIGFGTLNAADQYLLPSISPLLSSI 173

Query: 184 MMIL----CAWYLSPNLEQP------EVGLAIGVFLGGLVQFLFQLPFLIKAGV-LVRPK 232
            +IL      W L   L          + LA G   G ++Q+L Q+    KAG+  +R +
Sbjct: 174 TVILGLGVAVWQLGQQLNTEPYWLLGSLLLAGGTTAGAVLQWLAQIVPQAKAGMGKLRLR 233

Query: 233 WGWKDPGVVKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGL 292
           + +  PGV ++  +MIPA     +  IN   + F ASF+   + + + Y + +   PLG+
Sbjct: 234 FNFALPGVKEVLQVMIPATLSSGMLYINFATNLFFASFIPNAAAA-MRYGNFVALTPLGI 292

Query: 293 FGIAIATVILPALSRKHVDAHSDGFAHTMDW---------GIRMVTFLGIPAMLGLMVLA 343
               I    LP  SR          A   DW         GI +      P    L+ LA
Sbjct: 293 ISNMILVPFLPVFSR---------LADPQDWPELKLRIRQGIMLSALTMFPLTAILVGLA 343

Query: 344 KPMLMVLFMRGEFTPSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGII 403
            P++ V++ RG F      + +  L AY  G+  ++   VL   +Y+  D  +P +  + 
Sbjct: 344 IPIVQVIYERGAFDAEAAAEVAPVLAAYGLGMFFYLGRDVLVRVFYALGDGNSPFKVSLF 403

Query: 404 AMVSNIVLNAIFAWFYGYVGLAVAT------SMSAFLNMA-LLYRGLHLQGVYHLTRKTV 456
            +  N +L+ +F   +G VG+ +AT      SM+ F+ M      GL L G      K V
Sbjct: 404 NIFLNGLLDYLFYKPFGTVGIVMATVGVNLFSMTIFIWMLNRRLAGLSLGGWAMDLGKLV 463

Query: 457 WFVARLAMAGAVMTGALLWQLDTMATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVR 516
              A  ++AG    G++LWQ         WG++  +L    L  L ++S + ++  +GV 
Sbjct: 464 GVTAIASVAG--WQGSVLWQ-------RLWGVN--SLVENILEVLTMSSIILVVFTVGVA 512

Query: 517 L 517
           L
Sbjct: 513 L 513