Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., murein biosynthesis integral membrane protein MurJ from Rhodopseudomonas palustris CGA009

 Score =  230 bits (586), Expect = 1e-64
 Identities = 171/521 (32%), Positives = 252/521 (48%), Gaps = 34/521 (6%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           +LK    V   TL+SR+ G  RD+++A ++GAG  AD FF A R+PN  R +FAEGAF+ 
Sbjct: 1   MLKRIFTVGGFTLLSRLTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP     H       +  L A    TL  L  +V L   L          A  F D  
Sbjct: 61  AFVPAYAHVHGEKG-EASAKLFADRIFTLLFLSQLVLLAVALAFMPQMMSILAPGFTD-- 117

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMI--- 186
                  +  LA  L +ITFPYL  IT V L G ILN + +FA ++   +FLN+ M+   
Sbjct: 118 ----DPEQRALAIELTRITFPYLLLITLVTLYGGILNVMQRFASAAAASIFLNISMMATL 173

Query: 187 -LCAWYLSPNLEQPEVGLAI--GVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKI 243
            L A++       P  G A   GV + G++Q+      L   G L R      D  V   
Sbjct: 174 ALAAFF-------PSAGHAAAWGVLISGVLQYFLLAGDLSLHGGLPRFARPKLDEDVRAF 226

Query: 244 RTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILP 303
              + PA  G   +Q+ L  D+ +A+FL  G++S LYY+DRL + P+G+ GIAI TV+LP
Sbjct: 227 FRALGPATLGSMGTQLALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLP 286

Query: 304 ALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQ 363
            +SR+       G   +            +P +   + +   ++  +F RG FT +D   
Sbjct: 287 EMSRQLTAGDDAGAKASQRRAFEFTLLFSVPFVAAFLTVPDEIMRAMFARGAFTRADAIS 346

Query: 364 ASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVG 423
           A  +L AY+  L+ F+LI+     +Y+R+DT TPV+  +  + +N+VL          VG
Sbjct: 347 AGTTLAAYAIALIPFVLIRSAVAPFYARKDTATPVKAALTGVATNVVLKFALMGSLAQVG 406

Query: 424 LAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATW 483
           LA+AT+  A++N+ L+       G     R+ V  + +  + G V+ GA LW    +  W
Sbjct: 407 LALATAAGAWINLLLVIFFSVRAGYLEFDRELVRAILKFGIIG-VLLGAALW----LTAW 461

Query: 484 LSWGI--------SQRALTLTGLIGLGVASYLAILLLLGVR 516
           L+           S+ AL L  L+G  V    AIL+L G R
Sbjct: 462 LAPPYLALLPALRSEAALALLILVG-AVIYGAAILILFGPR 501