Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., murein biosynthesis integral membrane protein MurJ from Rhodopseudomonas palustris CGA009

 Score =  206 bits (523), Expect = 2e-57
 Identities = 155/514 (30%), Positives = 256/514 (49%), Gaps = 22/514 (4%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           +L+  + VSA TL SR+LG VRD +VA L+GAG +AD F  A ++ N  RRL  EGA + 
Sbjct: 1   MLRPLLTVSAGTLSSRLLGFVRDALVAALLGAGVAADAFLLAFQLVNVTRRLLTEGALNA 60

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           A VP   +               R  GT+ +   ++ ++  +    + A+   G+     
Sbjct: 61  ALVPAWLKVREYNGTAAAAAFAGRLLGTIALATLLLAILLGVFMPLLIAVLAPGFV---- 116

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
            G PA     +A+   ++  PYL F   VA+   + N  GK  +++F+P+  N+ +I+  
Sbjct: 117 -GQPA---LVMATRDARLMLPYLAFAGPVAVMMGLFNAQGKVGLTAFSPLLFNISLIIVT 172

Query: 190 WYLSPNLEQPEVGLAI---GVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTL 246
             L    + P     I    V + GL+Q L  L F      L  P     D  +      
Sbjct: 173 AALLLGHDDPATAALILSGTVGIAGLLQ-LSILAFNGHGERLATPLRAGFDAAMRTFFAK 231

Query: 247 MIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALS 306
            IP +   S  Q+ ++  + +AS  Q  ++SWLY+++RL+E PLG+ G+A+  V++P L+
Sbjct: 232 AIPGMIANSGPQLLIVAGAIIAS-AQPAAVSWLYFANRLIELPLGIVGVAMGAVLVPELA 290

Query: 307 RKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASY 366
           R          +     G+ +   + +PA  GL+VLA+P++ +LF  G F+ +D    + 
Sbjct: 291 RAVRGGDRTALSEAASRGLELAVGVALPATFGLIVLAEPIVRLLFEHGAFSAADAAATAQ 350

Query: 367 SLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAV 426
           +L   ++GL + +L K  +  +++R+DT TP+   +I++   +V   +    +G  G+A 
Sbjct: 351 ALAVLAAGLPAQVLTKNWSAAFFAREDTGTPLMATLISVAVALVAAVLLGRLFGAAGVAA 410

Query: 427 ATSMSAFLNMALLY-RGLHLQGVY--HLTRKTVWFVARLAMAGAVMTGALLWQLDT--MA 481
           A S+ A+ N ALL  RG+   GV      R+ +  +A    AGA+  GALLWQ  +  + 
Sbjct: 411 AISIGAWSNAALLLGRGVQRFGVTIDASARRRLMLIA--LAAGAM--GALLWQASSFVLP 466

Query: 482 TWLSWGISQRALTLTGLIGLGVASYLAILLLLGV 515
              +     +A  L  LIG G+  Y A L+LLGV
Sbjct: 467 NAAAGSTLVQAAVLAVLIGGGLIVYAAALILLGV 500