Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., integral membrane protein MviN (RefSeq) from Shewanella loihica PV-4

 Score =  721 bits (1861), Expect = 0.0
 Identities = 363/517 (70%), Positives = 425/517 (82%)

Query: 6   VSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEG 65
           +SK+L KSG+IVSAMTLISRVLGLVRDVV+ANLMGAG+SADVFFFAN+IPNFLRRLFAEG
Sbjct: 1   MSKKLFKSGMIVSAMTLISRVLGLVRDVVIANLMGAGSSADVFFFANKIPNFLRRLFAEG 60

Query: 66  AFSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWF 125
           AF+QAFVPVLTEY    D    R+L+A+ +GTLG++VT+VTL+GV+ S  +TALFG GWF
Sbjct: 61  AFAQAFVPVLTEYQEKHDDQAVRELLAKVAGTLGLVVTLVTLMGVIASPLLTALFGGGWF 120

Query: 126 LDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMM 185
           L WLN  P   KFELASL+LKITFPYLWFITF AL+G+ILNT G+FAVS+FTPVFLNV +
Sbjct: 121 LAWLNDEPNGQKFELASLMLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNVAI 180

Query: 186 ILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRT 245
           I  A +L+P L+QPE+GLA GVF GGL+QFLFQ+PFL +   LV+P WGW  PGVVKIRT
Sbjct: 181 ISAALFLAPKLDQPEIGLAWGVFAGGLIQFLFQIPFLFREKALVKPSWGWHHPGVVKIRT 240

Query: 246 LMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 305
           LM+PALFGVSVSQINLL D+F+ASFL TGSISWLYYSDRLLEFPLGLFGIAIATVILPAL
Sbjct: 241 LMLPALFGVSVSQINLLLDTFIASFLVTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 300

Query: 306 SRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQAS 365
           S+KHV+A  DGFA TMDWGI+ +  +G+PAM GL+VLAKPMLMVLFMRG FT  DV+ AS
Sbjct: 301 SKKHVNAEGDGFAKTMDWGIKAILLMGVPAMCGLIVLAKPMLMVLFMRGAFTLDDVDMAS 360

Query: 366 YSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLA 425
           YSL+AY SGLLSFMLIKVLAPGYYSRQDTKTPVRYGI+AMVSN+V N IF + +GYVGLA
Sbjct: 361 YSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIVAMVSNMVFNLIFVFPFGYVGLA 420

Query: 426 VATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLS 485
           +ATS+SA LN +LLYRGLH  GVY + R+T  F+ +  +A A+M   L   L ++ TWL+
Sbjct: 421 IATSLSALLNASLLYRGLHRAGVYQIPRQTFVFMGKTLVAAALMIAVLYLLLPSIDTWLA 480

Query: 486 WGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKA 522
                RA  L  LIG G   YL  +LLLG+R   +KA
Sbjct: 481 LSFMGRATQLAYLIGAGAVVYLLAMLLLGIRPWRMKA 517