Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., integral membrane protein MviN (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  212 bits (540), Expect = 3e-59
 Identities = 162/558 (29%), Positives = 251/558 (44%), Gaps = 51/558 (9%)

Query: 7   SKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGA 66
           S  + ++   V+  TL+SRVLG  RD + A+++GAGA AD FF A R+PN +RRL  EGA
Sbjct: 37  STSMARNAATVAGATLVSRVLGYARDALTAHILGAGAGADAFFVAFRLPNLMRRLLGEGA 96

Query: 67  FSQAFVPVLTEYHASGDINKTRDLIARASGTLGVL-VTIVTLIGVLGSGAVTALFGAGWF 125
            S AF P        G+ N       R      +L + ++ L G+  +  +  L   G+ 
Sbjct: 97  VSLAFTPAYVRLR-EGEGNARAFAFGRGVVLRALLPLALLCLAGMALAHPLALLLAPGFG 155

Query: 126 LDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMM 185
                     G  + A+ LL+I  PY    T  AL   +L+  G+F   +  P  LN+++
Sbjct: 156 AQ----DAPPGVTDRAAHLLRICLPYGVAATCAALCAGMLHAHGRFLPPALAPAVLNLVV 211

Query: 186 ILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRT 245
           +                LA GV  GG+ Q   QL  L   G+  R      DP   +   
Sbjct: 212 MATGGLALAGFGDAATLLACGVLAGGVAQLGLQLTALHPLGLRWRAPLPRSDPQAGEAAR 271

Query: 246 LMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 305
            +   +FG S  Q+N+L  + +ASFL  GS++ LYY++RL+EFPLG+FG+A+    LPAL
Sbjct: 272 ALPAGVFGASAQQLNVLACTLLASFLSEGSVTALYYAERLMEFPLGVFGVAVGVAALPAL 331

Query: 306 S----------RKHVDA------------------------------HSDGFAHTMDWGI 325
           S          R H  A                                DGF   +   +
Sbjct: 332 SAQAGQADPFARAHRSAPCGPSSLSGASGPSGPSGLSGLSGPCDTTHPHDGFRQVLSDAL 391

Query: 326 RMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLLAYSSGLLSFMLIKVLA 385
           R+  F+ +P+ LGL  +A P++ +LF  G F    V+    +LLAY+ G+ +F + + L 
Sbjct: 392 RLSLFISLPSALGLAAVAVPLVALLFGHGAFDHQAVDATVAALLAYAPGIPAFAVTRPLL 451

Query: 386 PGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHL 445
               +RQ T  PV  G++++V  + L A+     G  G A+A S +A++N A L   L  
Sbjct: 452 AACNARQATGAPVAAGLVSVVVTLALGALLLKPLGVAGPALAASCAAWVNTACLILALRR 511

Query: 446 QGV-YHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGISQRALTLTGLIGLGVA 504
            G+      ++    A LA A  +      W L       +W        +   +G+ +A
Sbjct: 512 GGIPVDTYPRSALLHAALACAACLPA----WWLAGAGAGTAWAAPALHPAVRLALGVPLA 567

Query: 505 SYLAILLLLGVRLKDLKA 522
           + L + L L    +D +A
Sbjct: 568 AVLYLALSLCCHSRDARA 585