Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., MviN protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  720 bits (1858), Expect = 0.0
 Identities = 359/516 (69%), Positives = 427/516 (82%)

Query: 6   VSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEG 65
           +SK+LLKSG+IVSAMTLISRVLGLVRDVVVANL+GAG SADVFFFAN+IPNFLRRLFAEG
Sbjct: 1   MSKKLLKSGMIVSAMTLISRVLGLVRDVVVANLLGAGTSADVFFFANKIPNFLRRLFAEG 60

Query: 66  AFSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWF 125
           AF+QAFVPVLTEY      ++TR+L+++ +GTLG+LVT+VTL+GV+ S  ++ALFG GWF
Sbjct: 61  AFAQAFVPVLTEYQEKHTSDETRELLSKVAGTLGLLVTVVTLVGVIASPVLSALFGGGWF 120

Query: 126 LDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMM 185
           + WLN  P   KFELA+++LKITFPYLWFITF AL+G+ILNT G+FAVS+FTPVFLNV +
Sbjct: 121 VAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNVAI 180

Query: 186 ILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRT 245
           I  A + +P   QPE+ LA GVF GGL+QFLFQ+PFL++   LV+P WGW  PGVVKIRT
Sbjct: 181 IAAAMFFAPTSSQPEITLAWGVFWGGLIQFLFQIPFLLREKALVKPSWGWNHPGVVKIRT 240

Query: 246 LMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 305
           LMIPALFGVSVSQINLLFD+F+ASFL TGSISWLYYSDRLLEFPLGLFGIAIATVILPAL
Sbjct: 241 LMIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 300

Query: 306 SRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQAS 365
           SR HV+A  DGF  TMDWGI+ +  LG+PAM+GL+VLA+PMLMVLFMRG FT +DV+ AS
Sbjct: 301 SRNHVNAEGDGFGKTMDWGIKAILLLGLPAMMGLIVLAQPMLMVLFMRGAFTINDVQMAS 360

Query: 366 YSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLA 425
           YSL+AY SGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAM++N+V N IFA  +GYVGLA
Sbjct: 361 YSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMITNMVFNLIFAIPFGYVGLA 420

Query: 426 VATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLS 485
           VATSMSA LN  LLYRGLH  GVY +T+ T+ F  +  ++ A+M   L + L + + WL 
Sbjct: 421 VATSMSALLNATLLYRGLHKAGVYRITKPTMVFFLKAVVSTALMVVVLYYLLPSQSQWLE 480

Query: 486 WGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLK 521
           WG++ RA  L GLI +G  +YL  LL LG+R   +K
Sbjct: 481 WGLALRAKALIGLIVVGAMTYLVGLLALGIRPWSMK 516