Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., integral membrane protein MviN (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  207 bits (528), Expect = 6e-58
 Identities = 165/542 (30%), Positives = 250/542 (46%), Gaps = 71/542 (13%)

Query: 11  LKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQA 70
           ++   +++  TL+SR++G  RD   A ++GAG  AD F  A+R+P FLRR+F EG+ S A
Sbjct: 13  MRGAALIAGTTLVSRIMGFARDAATAYVLGAGVGADAFIVASRLPTFLRRMFGEGSMSMA 72

Query: 71  FVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLN 130
            VPV T     G               +   +T + L  V+ +  V AL   G       
Sbjct: 73  LVPVFTSVRRRGGDAAAFRAFRGMMFRVACWLTALCLGLVVFAPPVVALLAPGL------ 126

Query: 131 GGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCAW 190
             P  G   LA+ LL++   Y+ ++    +   +L++ G+  + +  PV  NV M++ A 
Sbjct: 127 -APEVGG--LAASLLRVCAFYVLWVGLAGVCMGLLHSRGELFIPACAPVAFNVAMLVGAA 183

Query: 191 YLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAG---------------------VLV 229
             +    +PE  LA GV  GG  Q L Q   L++AG                     V+ 
Sbjct: 184 LAAFGPWRPEYMLACGVVAGGFAQLLVQAVPLLRAGAFRTSTKEVPAQQASTVREGPVMH 243

Query: 230 RPKWGWKDPG---------------VVKIRTL---MIPAL---FGVSVSQINLLFDSFVA 268
               G K P                V+  RT    M+ AL   FG S  Q  +L  + VA
Sbjct: 244 GAAVGQKVPDAAGATQTSAETPSGPVMDGRTAPLRMLSALGGVFGASAHQAGVLLSTMVA 303

Query: 269 SFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDAHSDGFAHTMDWGIRMV 328
           SFL  G ++ LYY++RL+EFPLG+FG+AI T  LP L+  H     + F   +  G+R+ 
Sbjct: 304 SFLGDGGVASLYYAERLVEFPLGVFGVAIGTASLPVLASLHAAGRREHFETLLRQGVRLS 363

Query: 329 TFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLLAYSSGLLSFMLIKVLAPGY 388
            F+ +PA  GLM +A P++ VLF  G F  + V     +L AY+ GL +F L + L    
Sbjct: 364 LFVTLPAAAGLMAVAHPLVQVLFGHGAFDAAAVAGTVTALCAYAPGLPAFALGRTLLAAT 423

Query: 389 YSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQGV 448
           ++R DT+TPV   ++++   +V     +   G  G  +A S+ A+ N  L    LHL  V
Sbjct: 424 HARGDTRTPVLAALVSLAVVLVAGLALSGPLGVAGPPLAASLGAWCNTLL----LHLSIV 479

Query: 449 YHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGISQRALTLTGLIGLGVASYLA 508
              TR  +       M+  + T  L   L     WL  G+ +R      L+GLG    L 
Sbjct: 480 RTGTRCPL-------MSWGLATQGL---LSVALFWLVGGLMER------LVGLGAGWTLV 523

Query: 509 IL 510
           ++
Sbjct: 524 LV 525