Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., integral membrane protein MviN (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  250 bits (638), Expect = 1e-70
 Identities = 177/537 (32%), Positives = 270/537 (50%), Gaps = 34/537 (6%)

Query: 9   RLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFS 68
           RLL   + V   T+ SRVLG VRD+++A L+GAG  AD FF A  +PN  RR FAEGAF+
Sbjct: 5   RLLAGFMTVGLWTMGSRVLGFVRDILIAGLLGAGPVADAFFVAFSLPNMFRRFFAEGAFN 64

Query: 69  QAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDW 128
            AFVP+ ++   SGD          A   LG+++ + TL+ +     +     +G+  D 
Sbjct: 65  MAFVPMFSKRVQSGD--DPEGFARDALSGLGLILILFTLVALAAMPWLVLAMASGFVGD- 121

Query: 129 LNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILC 188
                   +F+LA    +I F Y+ FI+  AL   +LN  G+FA ++  P+ LNV++I  
Sbjct: 122 -------ARFDLAVGFGRIVFVYILFISLAALLSGVLNATGRFAAAAAAPILLNVILITA 174

Query: 189 AWYLSPNLEQP----------EVG----------LAIGVFLGGLVQFLFQLPFLIKAGVL 228
                  + +           E+G          LAIGV L G+ Q         KAG  
Sbjct: 175 LLVAETGVLEEVLILGGIGAFELGEIAGLHHGTMLAIGVVLAGIAQLWLLWRAAAKAGFP 234

Query: 229 VRPKWGWKDPGVVKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEF 288
           +RP+     P + ++  +  PA     V Q+NLL    VASF   G+I+WL Y+DRL + 
Sbjct: 235 LRPRRPRMTPELKRLAIIAAPAALAGGVVQVNLLVGRQVASFFD-GAIAWLNYADRLYQL 293

Query: 289 PLGLFGIAIATVILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLM 348
           PLG+ GIAI  V+LP LSR+     + G     +    +   L +PA + L+ + + ++ 
Sbjct: 294 PLGVVGIAIGIVLLPDLSRRLQAGDTAGGQDAFNRAGEICLALTVPAAVALLCIPEALVS 353

Query: 349 VLFMRGEFTPSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSN 408
           VLF RG FT  D    + ++  Y  GL +F+L KV  P +++R+DT++P+RY + AMV N
Sbjct: 354 VLFERGRFTAEDSAATALAVAVYGVGLPAFVLQKVFQPLFFAREDTRSPLRYALWAMVVN 413

Query: 409 IVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQG-VYHLTRKTVWFVARLAMAGA 467
             +    A   GYV  A+  S++ +  + LL+RG    G       +    + R+ +A  
Sbjct: 414 AGIAIGLAPVIGYVAAALGASLAGWAMVWLLWRGSRPLGEAAAFDARFKARIGRIVLAAL 473

Query: 468 VMTGALLWQLDTMATWLSWGISQRALTLTGLIGLGVASYLAILLLLGV-RLKDLKAA 523
            M   LL   + ++  L    + R   L  L+ LG+ SY A   LLG  R+ ++K A
Sbjct: 474 AMGAVLLGAQELLSEALRTP-TLRYGALAALVALGIVSYGAAGHLLGAFRMAEVKRA 529