Pairwise Alignments

Query, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., murein biosynthesis integral membrane protein MurJ from Ralstonia sp. UNC404CL21Col

 Score =  357 bits (916), Expect = e-103
 Identities = 192/521 (36%), Positives = 305/521 (58%), Gaps = 19/521 (3%)

Query: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69
           LLK+   +S +T++SR+ GL+R+ ++A   GA    D F  A RIPN LRRL AEGAFSQ
Sbjct: 3   LLKTLATISGLTMLSRITGLIRETLIARAFGASVYTDAFNVAFRIPNLLRRLSAEGAFSQ 62

Query: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129
           AFVP+L E+       +TR L+   +  +   + I++ +GV+G+  +      G+     
Sbjct: 63  AFVPILGEFKNRQGEAETRALVDSVATVMTWFLVIISALGVIGAPLIVTAVATGF----- 117

Query: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189
                +  +  A  + ++ FPY+  ++ VAL+  ILNT  +FAV +FTPV LN+  I+ A
Sbjct: 118 -KEHESQAYISAIFMTRVMFPYIGLVSLVALASGILNTWRQFAVPAFTPVLLNLSFIVAA 176

Query: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWG----WKDPGVVKIRT 245
            +++P+LE P    A  V +GG++Q   Q+P L K G+L R  +     W  PGV ++  
Sbjct: 177 VFVAPHLETPIYAQAYAVMVGGILQLAIQIPSLRKVGMLPRVSFNVRAAWHHPGVRRVLK 236

Query: 246 LMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPAL 305
            M+PA   VSV+QI+L+ ++ +AS L TGS+SWL Y+DRL+EFP  L G+A+ T++LP+L
Sbjct: 237 QMLPATLSVSVAQISLIINTNIASRLPTGSVSWLNYADRLMEFPTALLGVALGTILLPSL 296

Query: 306 SRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQAS 365
           S+   + + + ++  +DWG+R+   L +P+ +GL V   P+   LF  G+FT  DVE   
Sbjct: 297 SKASAENNREEYSSLLDWGLRLTVLLAVPSAVGLFVFGAPLTATLFHYGKFTGMDVEMTR 356

Query: 366 YSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLA 425
            +L +Y  GL+  ++IK+LAPG+Y+RQD +TPV+  ++ +V+  + N +F   +G+ GLA
Sbjct: 357 QALTSYGVGLIGLIVIKILAPGFYARQDIRTPVKIALVVLVATQLSNYVFVPIFGHAGLA 416

Query: 426 VATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLS 485
           ++ S  A +N ALL+ GL  +G YH       F+A++  A  ++ GALLW    +A    
Sbjct: 417 LSISFGATINAALLFFGLRRRGYYHPLPGWGLFIAQVMSAVLLLAGALLW----LAHNFD 472

Query: 486 W-GISQRALTLTGLIG----LGVASYLAILLLLGVRLKDLK 521
           W G+  + L    L+G    L    Y   L L G++    +
Sbjct: 473 WVGLGAKPLVRIALLGASLVLCAVVYFGTLWLTGLKFSTFR 513