Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 3/157 (1%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           +  + L  F  VC  GS+ +AA+ L   P  +T ++K+LE  L   L  R GR +  +  
Sbjct: 1   MELSQLRMFKTVCDTGSIARAAEVLHCVPSNITARLKSLERELGTPLFFREGRGLRVSPA 60

Query: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGDNRIH 123
           G++   YA ++ GL+ E    VN S   +    +G  ++ +   + ++L        ++ 
Sbjct: 61  GEVFLGYATKILGLTEEARRAVNPSHTPSGPLRIGAIESSATGRLPQLLAKYHAQYPQVS 120

Query: 124 LRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGL 160
           L     T   LL+    H+LD ++    V   + PGL
Sbjct: 121 LELSTGTWAQLLDDTQHHRLDGVIVAVDV---ERPGL 154