Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transcriptional regulatory protein, LysR family from Phaeobacter inhibens DSM 17395

 Score = 99.8 bits (247), Expect = 7e-26
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 6/290 (2%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           LNY+HL YFW V   G++T+ A  L L+   ++ QIK LE+RL   L  R GR +  TE 
Sbjct: 3   LNYHHLRYFWAVAHDGNLTRTAQRLNLSQSALSVQIKQLEERLGHPLFDRRGRQLHLTEA 62

Query: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVP-GDNRI 122
           G++   +AD +F    E++  +  + RS     VG    LS+      L   +   D  +
Sbjct: 63  GRIALDHADAIFATGQELIATLEDTGRSRQALRVGALATLSRNFQIGFLRPMLARSDVEV 122

Query: 123 HLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGD--VDF 180
            LR    T   LLE LA   LD++L +    +       + ++ +  +S     D     
Sbjct: 123 ILRSGSPTE--LLEGLATLNLDLVLMNREPPNDSLTPYETHQIADQAVSIVGTPDRLNPR 180

Query: 181 APFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDAVF 240
            P   +L ++  ++P +   +         R  + P +  E DD A+M+  A        
Sbjct: 181 LPIRELLTTQPFVLPTTDNTVRTAFDAMASRLSVVPQVAAEVDDMAMMRLLAREDIGLAL 240

Query: 241 MAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNVCDAD 290
           +AP     E+ +   L+   H   I+E +Y I   R   +P V+ +   D
Sbjct: 241 VAPIVVQDELSSGRLLEAEDH-PRIRETFYAITLRRRFPNPLVQELLAVD 289