Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., transcriptional regulator from Dechlorosoma suillum PS

 Score =  177 bits (449), Expect = 3e-49
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 5/287 (1%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           LN+ HL+YFW+V K+G +++AA+ L +  QT++ Q+K LE  L   L  + GR +  TE 
Sbjct: 11  LNHRHLHYFWVVAKEGGISRAAERLGVAVQTISAQLKELEQSLGTALFTQEGRRLVLTEA 70

Query: 64  GQLVFKYADRMFGLSYEMLDIVN-YSQRSNLLFDVGVADALSKRLVSKILLTSVPGDNRI 122
           G+    YAD++F L  ++ + +   S  ++L   VG++DAL K +  ++L  ++     +
Sbjct: 71  GRTALHYADQIFLLGEQLQEALQLQSAAASLKLTVGISDALPKLIAYRLLQAAIDLPQPV 130

Query: 123 HLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDV--DF 180
            L C E   + LL  LA HKLD++L+D P  S  +  ++S  LGE RM  F+  ++   +
Sbjct: 131 RLVCHEGEFDELLADLALHKLDVVLTDRPAGSRPNLRVYSHPLGECRMGVFATAELAARY 190

Query: 181 AP-FPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDAV 239
            P FP  L    LL+P   TA+  ++  W   + L+P ++GEF+DSALM  F       +
Sbjct: 191 GPGFPDSLNGAPLLLPTRDTALRGRIDAWLSARNLRPDVVGEFEDSALMMTFG-RSGLGL 249

Query: 240 FMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNV 286
           F AP+     ++ +   + +G +++++E++Y I  ER I+HPAV+ +
Sbjct: 250 FPAPTLLADALEEQFRARPVGGMEDVREQFYAISNERKIRHPAVEAI 296