Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional Regulator, LysR family protein from Marinobacter adhaerens HP15

 Score =  138 bits (348), Expect = 1e-37
 Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 5/293 (1%)

Query: 1   MSHLNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEP 60
           M  LN  HLYYFW++ ++GS+ +A++ L L PQT++GQ+   E  + G+L  R  R +  
Sbjct: 1   MEQLNLRHLYYFWVISREGSIARASEVLELAPQTLSGQLATFEASVGGRLFSRERRKLIL 60

Query: 61  TELGQLVFKYADRMFGLSYEMLDIVNYSQRSN-LLFDVGVADALSKRLVSKILLTSVPGD 119
           T+ G+L+  YAD +F L+ E+ + +        L    GV+ ++ K +   +L  ++ G+
Sbjct: 61  TDYGRLILGYADDIFALTGELAETLRLDPSERPLTLRAGVSASIHKLIAYYLLQPAMAGE 120

Query: 120 NRIHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDVD 179
             I L C     E L+  L + +LD++L+D      +   L    L  S MS F+  ++ 
Sbjct: 121 RSIQLECQTGRTEDLVLSLKRKELDLVLTDRVPRLQEDGNLTVHPLAGSSMSLFAAPELA 180

Query: 180 ---FAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHS 236
                 FP  L  + LL   +      ++  WF   G++  ++   DDSAL+K F     
Sbjct: 181 RKLKKGFPESLNGQPLLANATDAPYFERLMNWFSLNGVRMKLVARVDDSALIKVFG-SQG 239

Query: 237 DAVFMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNVCDA 289
             VF AP+    EV  +  ++ I  ++++ +E + I   R   H  V+ + DA
Sbjct: 240 YGVFAAPTSIREEVCRQYEVEQIASIEDVMDELFAITRGRKTAHEGVRAIVDA 292