Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Klebsiella michiganensis M5al

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 9   LYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTELGQLVF 68
           L YF  V +Q S T+AA+ LF+T  T++  +K LED L   L  R+GR +  T+ G++VF
Sbjct: 6   LRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELSCTLLIRDGRRLLLTDTGRVVF 65

Query: 69  KYADRMFGLSYEM---LDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGDNRIHLR 125
           +    + G  +++   L  +N+  +  L   +     +   L+++ +         + L+
Sbjct: 66  ERGQAILGEFHQLESELSDINHLHKGVLRLGI---PPMVGMLMAEPISHFRQRYAGVELK 122

Query: 126 CFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDVDFAP--- 182
             E     + + ++  +LD+ ++  PVD +          G + +S FS       P   
Sbjct: 123 IAEFGGLTVQQAVSNGELDLAMTALPVDEAS---------GLTTLSLFSHPLCVLTPRTA 173

Query: 183 --------FPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHIL---GEFDDSALM 228
                    P  L +  L++     A+ +++ + F +  ++P I    G++D  A M
Sbjct: 174 QWESIASLSPEALAAYPLVIYNEDFALSQQLMRLFAQHDVKPRIAVRSGQWDFLAAM 230