Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  155 bits (393), Expect = 8e-43
 Identities = 94/288 (32%), Positives = 150/288 (52%), Gaps = 7/288 (2%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           LNY HLYYFW+V K+G   +AA+ L +  QT++ Q++ LE  +  +L K  GR +  TE 
Sbjct: 2   LNYRHLYYFWIVVKEGGFARAAERLDMAVQTISAQVRELEKSIGRQLLKPAGRGVTMTEA 61

Query: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRSNLL-FDVGVADALSKRLVSKILLTSVPGDNRI 122
           G+  F  A+++F L   +LD +  +    +    VG++D +SK L +  LL  V G   +
Sbjct: 62  GETAFNRAEQIFQLGEALLDDMREAGGEGVARLAVGLSDGISK-LAAHALLAPVLGTPSL 120

Query: 123 HLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDV---- 178
            L C E  H  L+ +LA H+LD++L+  P   +    + S++L  S + ++    +    
Sbjct: 121 RLLCHEGEHAELMSELALHRLDLVLACQPEPHNADLRVLSQRLAGSPVDWYGPTGIVRKS 180

Query: 179 DFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDA 238
             A FP  L    +L+P    A+  ++ +WFD QG++PHI+GEF+DSALM  FA      
Sbjct: 181 ARAGFPQCLAEVPVLLPTRHAALRARLDRWFDAQGIRPHIVGEFEDSALMAVFAA-RGLG 239

Query: 239 VFMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNV 286
           VF        ++     L+ +G  D + EE + I + R   H     V
Sbjct: 240 VFPLAELGAEDLSLLRGLRWLGRADGVIEEIHAIRSRRGQHHGLASQV 287