Pairwise Alignments

Query, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  194 bits (493), Expect = 2e-54
 Identities = 104/297 (35%), Positives = 167/297 (56%), Gaps = 6/297 (2%)

Query: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63
           +N+ HL+YFW+    G + +A + L ++PQT++GQIK LE+ LD KL +++GR++E T+ 
Sbjct: 1   MNFKHLHYFWVAAHAGGIVRAGEQLHISPQTLSGQIKLLEEALDKKLFRKSGRTLELTDA 60

Query: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRS--NLLFDVGVADALSKRLVSKILLTSVPGDNR 121
           G+L   YAD +F L  E+   V     +     F VG+AD++ K +  ++L  ++     
Sbjct: 61  GRLALDYADEIFSLGSELESAVRRENEAGPQTRFRVGIADSVPKAIAYRLLEPALSPSVS 120

Query: 122 IHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFF---SFGDV 178
           + + C E     LL QLA H+LD+I++D P+ +  +   F+ +LG S +S F   +    
Sbjct: 121 VRMICHEGKLHALLAQLALHRLDLIIADAPIPADVNVKAFNHRLGRSTLSCFGAPALIQS 180

Query: 179 DFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDA 238
               FP  L    +L+PG+ +A+ RK+  W     + P I+GEFDD A+  AFA      
Sbjct: 181 GKKRFPLSLGQLPVLLPGTESAVRRKLDHWLASHAISPRIVGEFDDGAMTMAFA-REGRG 239

Query: 239 VFMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNVCDADFTNLF 295
           +  AP+   S++ AE  L  +G ++ I EE++ I  ER I HPAV  + DA  + LF
Sbjct: 240 LLFAPTVLESQLQAEHKLATVGQINSIVEEFFAISIERRISHPAVAMILDAARSELF 296