Pairwise Alignments

Query, 283 a.a., thymidylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Thymidylate synthase (EC 2.1.1.45) from Pseudomonas fluorescens FW300-N2E2

 Score =  174 bits (441), Expect = 2e-48
 Identities = 108/326 (33%), Positives = 170/326 (52%), Gaps = 46/326 (14%)

Query: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60
           M+QYL+L   ++  G    N RTG   ++   A L YD+ +  FP +TTRK  +K+A+ E
Sbjct: 1   MKQYLELVAHVIKNGTKQAN-RTGVNTISFPGAMLRYDLKDG-FPAITTRKMAFKSAIGE 58

Query: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAK--- 117
           + G++RG +NAA+FR LG K WD NAN N  WL NP+R+G+DD+G +YGVQ R W     
Sbjct: 59  MCGFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQ 118

Query: 118 -----------------------PDGGH--------IDQLKKIVDDLSRGVDDRGEILNF 146
                                   + G         IDQ+++ VD + +    R  + + 
Sbjct: 119 IPLSNPAAIEQTLAQGYRQIAEGEENGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHG 178

Query: 147 YNPGEFHMGCLRPC--MYSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVFLALMAQ 204
           +N  +     L PC  +Y  H ++    + L    RS D+ LG  FN+ +    L+L+ +
Sbjct: 179 WNCAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLIGR 238

Query: 205 ITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPFPAPQFHINPKI----KTLQDLETW 260
           +TG  P    + I +AH+Y++ L+++ + QLKREPFP P+  I+ ++    +T +    W
Sbjct: 239 LTGYTPRWFTYFIGDAHVYENHLDMLNE-QLKREPFPMPKLVISERVPAFAETGEYQPEW 297

Query: 261 VTL---DDFDVTGYQFHDPIQYPFSV 283
           + L    DF + GYQ H P+  P +V
Sbjct: 298 LELVEPGDFSLEGYQHHAPMTAPMAV 323