Pairwise Alignments

Query, 283 a.a., thymidylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., thymidylate synthase from Pseudomonas syringae pv. syringae B728a

 Score =  173 bits (438), Expect = 5e-48
 Identities = 108/326 (33%), Positives = 169/326 (51%), Gaps = 46/326 (14%)

Query: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60
           M+QYL+L   ++  G    N RTG   ++   A L YD+    FP +TTR+  +K+A+ E
Sbjct: 1   MKQYLELVAHVIKHGTLQAN-RTGVNTISFPGAMLRYDLQEG-FPAITTRRMAFKSAIGE 58

Query: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAW---AK 117
           ++G++RG +NAA+FR+LG K WD NAN N  WLNNP+RKGEDD+G +YGVQ R W    +
Sbjct: 59  MVGFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKR 118

Query: 118 PDGGH-------------------------------IDQLKKIVDDLSRGVDDRGEILNF 146
            D G+                               IDQ+++ VD +      R  + + 
Sbjct: 119 IDAGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHG 178

Query: 147 YNPGEFHMGCLRPC--MYSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVFLALMAQ 204
           +N  +     L PC  +Y  H +     + L    RS D+ LG  FN+ +    L+L+ +
Sbjct: 179 WNCAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGR 238

Query: 205 ITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPFPAPQFHINPKI----KTLQDLETW 260
           +TG  P    + I +AH+Y++ L+++ + Q+ REP+P P+  I+ ++    KT      W
Sbjct: 239 LTGYTPRWFTYFIGDAHVYENHLDMLNE-QMTREPYPMPKLVISDRVPEFAKTGVYQPEW 297

Query: 261 VTL---DDFDVTGYQFHDPIQYPFSV 283
           + L    DF + GYQ H  +  P +V
Sbjct: 298 LGLIEPSDFTLEGYQHHPAMTAPMAV 323