Pairwise Alignments

Query, 283 a.a., thymidylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., thymidylate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (323), Expect = 9e-35
 Identities = 90/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60
           M+QYLDL + I+ +GV  +++RTG    +V    + +D+    FPLVTT+K   ++ + E
Sbjct: 1   MQQYLDLMKHILAEGV-DKSDRTGTGTRSVFGYQMRFDLSKG-FPLVTTKKCHMRSIIHE 58

Query: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120
           LL +++G  N A  R      WD  A+ N             D+G VYG Q R+W    G
Sbjct: 59  LLWFLKGDTNIAYLRDNKVSIWDEWADEN------------GDLGPVYGAQWRSWPTQSG 106

Query: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180
             IDQ+ +++  +    D R  I++ +N GE     L PC     F +    L     QR
Sbjct: 107 EAIDQISQVIAQIKSQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQR 166

Query: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240
           SCDV LGL FN+    +   ++AQ      G       + H+Y + +E    +QL REP 
Sbjct: 167 SCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHME-QTALQLSREPR 225

Query: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283
           P P   I  K  ++ D +     DDF ++ Y  H  I+ P +V
Sbjct: 226 PLPTMTILRKPASIFDYQ----FDDFALSNYDPHPHIKAPVAV 264