Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., Two-component sensor CbrB: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N2E2

 Score =  188 bits (477), Expect = 4e-52
 Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%)

Query: 142 GNMGLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISV 201
           G +G+IG   PM+ L  +I+++ PTD ++LI GESGTGKE VA+A+H  S RA+ P ISV
Sbjct: 143 GEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISV 202

Query: 202 NCRAMSEKRLESELFG-----LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRF 256
           NC A+ E  +ESELFG           G+   +  ADGGTL L++I  LP   Q  LLR 
Sbjct: 203 NCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRV 262

Query: 257 LQEGTVETRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERA 314
           LQEG +     V++  VDVR++AA   D++     G F E+LY+ ++V+ + +P+L+ER 
Sbjct: 263 LQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQFREDLYYRLHVIALKLPALRERG 322

Query: 315 SDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDT 372
           +D+  +A+ FL   S   N     F+ DA + +  Y WPGNVREL N ++R V++ ++
Sbjct: 323 ADVNEIAQAFLARQSARVNRTDLKFAPDAEQAIRHYAWPGNVRELENAVERAVILCES 380