Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Two-component response regulator CbrB from Pseudomonas syringae pv. syringae B728a

 Score =  187 bits (475), Expect = 6e-52
 Identities = 102/254 (40%), Positives = 152/254 (59%), Gaps = 7/254 (2%)

Query: 142 GNMGLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISV 201
           G +G+IG   PM  L  +I+++ PTD ++LI GESGTGKE VA+A+H  S RA+ P ISV
Sbjct: 162 GEIGIIGSCPPMLDLYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISV 221

Query: 202 NCRAMSEKRLESELFG-----LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRF 256
           NC A+ E  +ESELFG           G+   +  ADGGTL L++I  LP   Q  LLR 
Sbjct: 222 NCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRV 281

Query: 257 LQEGTVETRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERA 314
           LQEG +     V++  VDVR++AA   D++    +G+F E+L++ ++V+ + +P+L+ER 
Sbjct: 282 LQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKNGEFREDLFYRLHVIALKLPALRERG 341

Query: 315 SDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVV 374
           +DI+ +A  FL   S +       F+ DA + +  Y WPGNVREL N ++R V++ +   
Sbjct: 342 NDILEIAHAFLVRQSGKVGRDDLKFAHDAEQAIRHYSWPGNVRELENAVERSVILCENPE 401

Query: 375 LDESQLDLPKRSDG 388
           +    L +    DG
Sbjct: 402 ITADLLGIDIELDG 415