Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  191 bits (484), Expect = 6e-53
 Identities = 117/307 (38%), Positives = 178/307 (57%), Gaps = 15/307 (4%)

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           +IG S PM+ + D I ++  T  ++LI GESG GKE VA AIH   + A+ PFI  NC A
Sbjct: 220 IIGTSKPMQEVYDLIHKVAMTKATVLILGESGVGKELVASAIHYNGATAEGPFIKFNCAA 279

Query: 206 MSEKRLESELFG------LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQE 259
           + E   ESELFG       G   + +  F + ADGGT+ L+++  L  + Q  LLR LQE
Sbjct: 280 LPESLGESELFGHEKGAFTGAIAQRKGRFEM-ADGGTIFLDEVGELSLAMQAKLLRVLQE 338

Query: 260 GTVETRQGVRAV--DVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDI 317
            T E   G R+V  DVRI+AA + ++ + +  G F E+L++ +NV  I +P L++R SD+
Sbjct: 339 KTFERVGGGRSVRVDVRIIAATNRNLPEMVEKGTFREDLFYRLNVFPITLPPLRDRGSDV 398

Query: 318 VLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDE 377
           +LL  HF+  ++ E   +A+  S  A+  L  YHWPGNVREL N I+R V++S+  V+  
Sbjct: 399 ILLVDHFIARHAAEGGREAKRVSTPALTMLMAYHWPGNVRELENVIERSVILSEDGVIHG 458

Query: 378 SQL--DLPKRSDGRRS----LKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYR 431
             L   L   ++   S    L++  +  E + ++  L++H G  + AAKELG++R  +  
Sbjct: 459 YNLPPSLQTATETGTSFGCGLEAKLQAVEYEMIVEALKTHGGNATEAAKELGLTRRILGL 518

Query: 432 LLNKHNL 438
            + K+ L
Sbjct: 519 RMEKYAL 525