Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  196 bits (497), Expect = 2e-54
 Identities = 120/305 (39%), Positives = 171/305 (56%), Gaps = 13/305 (4%)

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           L+G S  M+ L ++ + +  +D S+ I G SGTGKE +A+AIH  S RA KPF+++NC A
Sbjct: 137 LVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLARAIHLASPRADKPFVAINCAA 196

Query: 206 MSEKRLESELFG------LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQE 259
           + E  LESELFG       G T   +  FL +ADGGT+ L++I  +P S Q  LLR LQE
Sbjct: 197 IPENLLESELFGHRKGAFTGATYNHKGLFL-EADGGTVFLDEIGDMPLSLQAKLLRVLQE 255

Query: 260 GTVETRQGVRAV--DVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDI 317
             V      +AV  DVR+++A   D+++ L  G F E+LY+ +NV+ + +P L ER  DI
Sbjct: 256 RQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLYYRLNVVSLALPLLAERREDI 315

Query: 318 VLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDT----V 373
            LLA HFLQ  +  Y     +F+ DA+  L    WPGNVR+L N +++ V +S      V
Sbjct: 316 PLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVRQLQNVVEQAVALSPVSGGLV 375

Query: 374 VLDESQLDLPKRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLL 433
                Q  L        SL   ++  ERD L+ +L    G V+ AA+    +R   Y+LL
Sbjct: 376 PAALIQGALRSGDSAFTSLDEAKKVFERDYLVRLLRLTEGSVTQAARLAQRNRTEFYKLL 435

Query: 434 NKHNL 438
            +H L
Sbjct: 436 ERHQL 440