Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Fis family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  186 bits (473), Expect = 1e-51
 Identities = 113/324 (34%), Positives = 179/324 (55%), Gaps = 27/324 (8%)

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           ++GE  PM++L+  I R+ P+  S++I GESGTGKE VA+AIHK S R  KPFI++NC A
Sbjct: 272 MVGECRPMRQLKKLISRVAPSPSSVMIAGESGTGKEVVARAIHKLSDRHAKPFIAINCAA 331

Query: 206 MSEKRLESELFG------LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQE 259
           + E+ LESELFG       G +  G+   +  A+ GTL L++I  +P + Q  LLR ++ 
Sbjct: 332 IPEQLLESELFGYVKGAFTGASANGKTGLIQAANSGTLFLDEIGDMPLTLQAKLLRAIES 391

Query: 260 GTVETRQGVR--AVDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDI 317
             ++         VD+RI++A + ++E  + +G F E+LY+ +NV+ + +P L+ER  DI
Sbjct: 392 REIQPVGASHPVQVDIRIISATNQNLELYIAEGKFREDLYYRLNVIPLRLPPLRERQEDI 451

Query: 318 VLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVV-LMSDTVVLD 376
            LL  +FL  ++   N      + D +  L RY WPGN+REL N ++ +V ++    ++D
Sbjct: 452 ELLIHYFLHLHTGRLNLVYPGVAQDVIDFLKRYRWPGNIRELSNLMEYLVNVVPSGEIID 511

Query: 377 ESQL------------DLPKRSDGRRSLK-----SIRERSERDALLLVLESHSGQVSTAA 419
            S L              P  +    +L      +  E  ER  +   L  +S +   AA
Sbjct: 512 MSLLPPNLLSSSELASQPPSSASAAATLAQEENVTALEEMERQMIRDALSRYSNK-KQAA 570

Query: 420 KELGVSRATMYRLLNKHNLITDEN 443
            ELG+  AT+YR + K++L   +N
Sbjct: 571 DELGIGIATLYRKIKKYSLAAGQN 594