Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., transcriptional regulatory protein ZraR from Klebsiella michiganensis M5al

 Score =  204 bits (520), Expect = 4e-57
 Identities = 121/367 (32%), Positives = 206/367 (56%), Gaps = 22/367 (5%)

Query: 86  IREAQLSSDTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMG 145
           I  A  S DT  + + +  +D+   P+   +L  T+   L   +L +       +A   G
Sbjct: 82  IMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEALAHTRLSESPVTETPAA-QFG 140

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           ++G+S  M+ L + I  + P+D ++LI+GESGTGKE VA+A+H +S+R+++P + +NC A
Sbjct: 141 MVGDSPAMRALLNNITLVAPSDATVLIHGESGTGKELVARALHASSARSRRPLVILNCAA 200

Query: 206 MSEKRLESELFGLGE-----TEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEG 260
           ++E  LESELFG  +      ++ ++   ++ADGGTL L++I  +    Q+ LLR +QE 
Sbjct: 201 LNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQER 260

Query: 261 TVET--RQGVRAVDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIV 318
            V+        +VDVR++AA   D+ + +  G F ++LY+ +NV+ I++P L+ R  DI 
Sbjct: 261 EVQRVGSNQTLSVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVTIDMPPLRHRREDIP 320

Query: 319 LLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDES 378
            LA++FLQ Y++      + F+  A+  L  Y WPGN+REL N ++R V++     + E 
Sbjct: 321 PLARYFLQRYAERNRKAVQGFTPQAMDLLIHYAWPGNIRELENAVERAVVLLTGEYISER 380

Query: 379 QL----------DLPKRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRAT 428
           +L          D P   D  + L  +    E++A+L  LE   G  + AA+ LG++R T
Sbjct: 381 ELPLAITGTPVADAPHGDDSIQPLVEV----EKEAILAALERTGGNKTEAARRLGITRKT 436

Query: 429 MYRLLNK 435
           +   L++
Sbjct: 437 LLAKLSR 443