Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  199 bits (506), Expect = 2e-55
 Identities = 133/368 (36%), Positives = 197/368 (53%), Gaps = 39/368 (10%)

Query: 106 DFFTAPIPDAQLLSTIGHQLGMLKL---EKKVWPHFGSAGNMG-LIGESMPMKRLRDQIK 161
           DF T P+   Q+   +   L   +L    +++       G  G L+GES  M+ +R  + 
Sbjct: 103 DFVTKPVEPEQVARVLRKGLERARLLDENRRLRDLVALVGESGELVGESPAMQSVRRTVA 162

Query: 162 RIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG---- 217
            + P+D ++LI GESGTGKE VA+ +H+ S R  +PF+++NC A+ E  LESELFG    
Sbjct: 163 TVAPSDYTVLIRGESGTGKEMVARMVHRLSPRVDEPFLALNCPAIPEHLLESELFGHVRG 222

Query: 218 -LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRA--VDVR 274
                E  ++     ADGGT+LL++I  +  + Q  LLRFLQEG V      R   VDVR
Sbjct: 223 AFTGAERDRKGLFSIADGGTVLLDEIGDISSNIQTKLLRFLQEGEVRPVGSPRNEHVDVR 282

Query: 275 ILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNA 334
           I+A+ + D+E  +   DF E+L++ +NV+ I VP L+ER SDI LLA  FL   S+E   
Sbjct: 283 IIASTNQDLEARMASRDFREDLFYRLNVVTIWVPPLRERLSDIPLLAATFLARASRELGV 342

Query: 335 QARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMS--DTVVLDESQL------------ 380
             R F +  +  L R  WPGNVREL N ++R+ L S  D + LD  Q             
Sbjct: 343 PQRDFDEGVLDHLMRREWPGNVRELQNYVRRLALFSRGDGITLDAVQQAEQSESGAPAAL 402

Query: 381 ---------DLPKRSDGRRSL-KSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMY 430
                    ++    D + SL +S  ER  RD    +LES  G V+ AA+  G+SR ++ 
Sbjct: 403 CVPSPVAEGEVMPYKDAKASLVESFSERYLRD----LLESTGGNVTEAARLSGLSRVSIQ 458

Query: 431 RLLNKHNL 438
           +++ ++ +
Sbjct: 459 KMVARYGI 466