Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., DNA-binding NtrC family response regulator from Paraburkholderia graminis OAS925

 Score =  255 bits (651), Expect = 2e-72
 Identities = 159/418 (38%), Positives = 232/418 (55%), Gaps = 13/418 (3%)

Query: 32  GWRCTQVADLRKADALFVETGPCIGIVDLSHDEFSLNGIANLVS--SHKQVRWLAFIREA 89
           GW    V   R A           G++DLS   F  + IA   S  +   V W+A     
Sbjct: 27  GWHVEVVGSARDARRAVRAGSAAGGLLDLS-SHFQPHEIAAFESCLTMPNVGWVAATMPG 85

Query: 90  QLSSDTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMG-LIG 148
           QL    + + + ++C D+ T P    +++ ++GH  GM+ L +    + GS G  G ++G
Sbjct: 86  QLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMISLGEPA-SNDGSQGAEGEMVG 144

Query: 149 ESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSE 208
               M  L   I+++  TD  + I GESGTGKE  A AIH+ SSR   PF+ +NC A+  
Sbjct: 145 SCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFVPINCGAIPP 204

Query: 209 KRLESELFGLGE---TEEGQQPF--LLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVE 263
             L+SELFG      T   Q+    +  A+GGTL L++I  LP   Q +LLRFLQE  VE
Sbjct: 205 HLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVE 264

Query: 264 TRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLA 321
              G  A  VDVRI++A   D+  A+I+G F  +LYH + VL+I+ P L+ R  DI LLA
Sbjct: 265 RLGGHSAIDVDVRIISATHVDMTAAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLA 324

Query: 322 KHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLD 381
           +H L+ + K+ + + R F+ DA+  L  Y WPGNVREL+N+++R ++MS+   +    L+
Sbjct: 325 RHMLERFKKDASRRLRGFAPDAIAALHNYGWPGNVRELINRVRRAIVMSEGRAITARDLE 384

Query: 382 LPKRSD-GRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           L +  +    SL   RE +ER A+ L L  H G++  AA+ELG+SR T+YRLL  H +
Sbjct: 385 LAEYVEIVPVSLAQAREAAERQAIELALLRHRGRLGDAAQELGISRVTLYRLLCSHGM 442