Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  182 bits (463), Expect = 1e-50
 Identities = 118/346 (34%), Positives = 184/346 (53%), Gaps = 18/346 (5%)

Query: 106 DFFTAPIPDAQLLSTIGHQLGMLKLEKK---VWPHFGSAGNMG--LIGESMPMKRLRDQI 160
           DF   P    +L+ T+   L   KL  +   +        ++   +IG S  ++++R  I
Sbjct: 101 DFIEKPFASERLIETVRRALERRKLVLENLALRRELAEQNSVAPRIIGRSPAIEQVRRLI 160

Query: 161 KRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG--- 217
             + PTD S+LI G++G GKE +A+++H+ S R  KPFI+VNC A+ E   ESE+FG   
Sbjct: 161 ANVAPTDASVLINGDTGAGKELIARSLHELSPRRDKPFIAVNCGALPEPMFESEMFGYEP 220

Query: 218 --LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVE---TRQGVRAVD 272
                  + +   L  A GGTL L++I ++P + Q+ LLR LQ+G +E   + Q +R V+
Sbjct: 221 GAFTGAAKRRVGKLEHASGGTLFLDEIESMPLALQVKLLRVLQDGVLERLGSNQPIR-VN 279

Query: 273 VRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEY 332
            R++AA   D+ + + DG F  +L + +NV+ I +P L ER  DIV L +HFL + +  Y
Sbjct: 280 CRVVAAAKGDMAEHVADGSFRRDLLYRLNVVTIALPPLGERREDIVPLFEHFLLDAAVRY 339

Query: 333 NAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLDLPKRSDGRRSL 392
              A   +D    GL +  WPGNVREL N   R VL     + D+  +         + L
Sbjct: 340 QRPAPILTDRQRAGLMQRDWPGNVRELRNAADRFVL----GIADDPVMSFGDDGAATQPL 395

Query: 393 KSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           K   E+ ER  +   LE   G V+ AA +L + +AT+Y  + ++ L
Sbjct: 396 KERVEQFERAVIAEALEQTGGVVAVAADKLQLGKATLYEKIKRYGL 441