Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Lysyl-tRNA synthetase (class II) from Pseudomonas stutzeri RCH2

 Score =  606 bits (1563), Expect = e-178
 Identities = 308/505 (60%), Positives = 379/505 (75%), Gaps = 9/505 (1%)

Query: 6   QNEINQEQIAQEENKLIAERRSKLDHIRKNCKANGHPNSFRRDSLAGDLQKKFGEKSKEE 65
           +  +NQ  I +EENKLIA+R+ KL  +R+  + N  PN FRRDS AGDLQK++ EK+KEE
Sbjct: 3   EQPLNQHAIQEEENKLIAQRKEKLAAVRE--QGNAFPNDFRRDSYAGDLQKQYAEKTKEE 60

Query: 66  LEALNHVVSIAGRVMAKRGPFLVIQETSGRIQAYAS-KEVQQELKDKYQGLDIGDIIGVQ 124
           LEA    V +AGR+M  RGPF+V+Q+ SGRIQ Y   K +  E  +  +  D+GDII  +
Sbjct: 61  LEAAAIPVKVAGRIMLNRGPFMVLQDMSGRIQVYVDRKTLPAEQVEAVKHFDLGDIIAAE 120

Query: 125 GALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFI 184
           G L +SGKGDLYV M   +LLTK+LRPLP+KFHGLTD E RYRQRYVDL+VNE  R  F 
Sbjct: 121 GTLARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFR 180

Query: 185 VRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLK 244
           VRS+V+S IR F+  + F+EVETPM+  IPGGA+A+PF THHNALDMPM+LRIAPELYLK
Sbjct: 181 VRSQVISHIRKFLAERHFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLK 240

Query: 245 RLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEV 304
           RLVVGGF+RVFEINRNFRNEG+S RHNPEFTM+EFY AYADY+D MDLTEEL   +A  V
Sbjct: 241 RLVVGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAV 300

Query: 305 LGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVH 364
           LGST +PYG+    FG  +AR+S+FD+I  YNP       ++ +D+ + +   +IAK   
Sbjct: 301 LGSTDVPYGDKVFHFGEPFARLSVFDSILKYNPE------ISADDLNDVEKARAIAKKAG 354

Query: 365 VDVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIG 424
             +      G+L   IF E  E KL QP FIT YP ++SPLARR+D NP  TDRFE FIG
Sbjct: 355 AKLLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDRNPNVTDRFELFIG 414

Query: 425 GREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGI 484
           GRE+AN +SELNDAEDQ  RF AQV  K++GDDEAM +DAD++ ALE+G+PPTAG+GIGI
Sbjct: 415 GREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGI 474

Query: 485 DRLVMLLTNTHTIRDVILFPAMRPQ 509
           DRLVMLLTN+ +IRDVILFP MRP+
Sbjct: 475 DRLVMLLTNSPSIRDVILFPHMRPE 499