Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., lysyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  405 bits (1042), Expect = e-117
 Identities = 223/501 (44%), Positives = 318/501 (63%), Gaps = 25/501 (4%)

Query: 25  RRSKLDHIRKNCKANGHPNSFRRDSL--AGDLQKKFGEKSKEELEALNHVVSIAGRVMAK 82
           R ++L+   +  +    P ++R D    A  LQ  + +    E  A+   V+IAGR+MA+
Sbjct: 5   RATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE--VAIAGRIMAR 62

Query: 83  RG----PFLVIQETSGRIQAYASKE--------VQQELKDKYQGL-DIGDIIGVQGALHK 129
           R      F  +Q+ SG+IQ Y  K+        +  E     + L D+GDI+GV+G++ +
Sbjct: 63  RVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSVRR 122

Query: 130 SGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKV 189
           + KG+L + ++Q+ +LTK+L+PLP+K+HGLTD E RYRQRYVDLIVN   R  F  R+K+
Sbjct: 123 TEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRAKI 182

Query: 190 MSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVG 249
            +AIR  +  + F+E+ETP++    GGA ARPFIT+HN L++ +YLRIA EL+LKRL+VG
Sbjct: 183 TAAIRRHLEDQGFIEIETPVLQAEAGGAEARPFITYHNTLELDLYLRIATELHLKRLIVG 242

Query: 250 GFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTS 309
           GF++VFE+ R FRNEG+S RHNPEFT +E Y AYADY+D+M LTE L++ VA +V+GS  
Sbjct: 243 GFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGSLQ 302

Query: 310 MPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDV-E 368
           +PY   T++    + R +M + +            +  E +++ +  ++  K+  + V E
Sbjct: 303 VPYQGQTIDLAPPWKRATMAELV-------LAATGIDFESLKDLEAGIAAVKAAGIPVPE 355

Query: 369 PFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREV 428
                G+LL   F E  E  L+QPTF+  YP +ISPLA+     P   +RFE FI GRE 
Sbjct: 356 DCPNLGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIVGRET 415

Query: 429 ANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLV 488
           AN FSEL D  DQ  R +AQ   K +G+ EA   D D++ ALEHG+PPT G GIGIDRLV
Sbjct: 416 ANSFSELTDPVDQRQRLEAQAADKAAGNVEANDVDEDFLLALEHGMPPTGGLGIGIDRLV 475

Query: 489 MLLTNTHTIRDVILFPAMRPQ 509
           MLLT++ +IRDVI FP +RP+
Sbjct: 476 MLLTDSPSIRDVIAFPLLRPE 496