Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., tRNA synthetase, class II (D, K and N) (NCBI) from Rhodospirillum rubrum S1H

 Score =  165 bits (417), Expect = 3e-45
 Identities = 110/349 (31%), Positives = 176/349 (50%), Gaps = 28/349 (8%)

Query: 180 RNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPG-GASARPFITHHNALDMP------ 232
           R   + R++  +AIR F+     +EV+TP + + PG     R F T    L+ P      
Sbjct: 18  RPFLLARARAAAAIRAFLGESGCIEVDTPALQISPGLEPHLRAFAT---TLEKPFDQGRA 74

Query: 233 -MYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMD 291
            + L  +PE  +K+++  G   +F++   FRN    P H+PEFTM+E+Y +   Y+ LM 
Sbjct: 75  TLRLHTSPEFAMKKILAAGETAIFQLAHVFRNGERGPTHHPEFTMLEWYRSAMSYEALMA 134

Query: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDI- 350
            TE+L+ +VA    G+  + +G+   +  G + R+S+  A++ Y    A I  L   D  
Sbjct: 135 ETEDLVRAVA-RATGAERLVWGDAAADPFGPWERLSVAQALERY----AGIDLLGALDAG 189

Query: 351 ---------QNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGETAEPKL--MQPTFITGYP 399
                     +   +   A+++ +   P      +   I  +  E +L   +P  +  YP
Sbjct: 190 VAISGNALEPDAGALAEAARAIGIACSPNDRFEDVFFRIVLDRVEHRLGHERPCILYDYP 249

Query: 400 ADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEA 459
           A ++ L+RR DD+P   +RFE ++GG E+AN F EL DA +Q ARF   ++ KE+   E 
Sbjct: 250 ACMAALSRRKDDDPRLAERFEVYVGGLELANAFGELTDAAEQRARFTHDMDVKEALYGER 309

Query: 460 MFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMRP 508
              D D++ AL+ GL P +G  +G DRLVML T    I DV+  P   P
Sbjct: 310 YPIDGDFLEALDQGLAPCSGIALGFDRLVMLCTGADAIDDVLWAPVADP 358