Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 25/212 (11%)

Query: 162 QEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMM-HVIPGGASAR 220
           +E R + RY+DL   E +    I RSKV SA+R F+    F+++ETP++    P GA  R
Sbjct: 120 EEQRLKYRYLDLRRPEMAER-IIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGA--R 176

Query: 221 PFITHHNALDMPMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEF 279
            ++          + L  +P+L+ + L++ GFDR ++I + FR+E L     PEFT ++ 
Sbjct: 177 DYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDI 236

Query: 280 YMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNH 339
             ++     +MD TEE++  +  E+L               G++ +M+  +A++ Y  + 
Sbjct: 237 ETSFMTSAQVMDKTEEMVRGLFKELLNVDL-----------GEFPKMTFAEAMRRYGSD- 284

Query: 340 AQIQALTEEDIQNRDLMVSIAKSV-HVDVEPF 370
                  + D++N   +V +A  V  VD + F
Sbjct: 285 -------KPDLRNPLELVDVADLVKDVDFKVF 309



 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 399 PADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDE 458
           P+ I+P    +D     +D ++  + G E+  G   + DAE Q A F+         D+E
Sbjct: 455 PSGITPAELEADPTAAISDAYDMVLNGCELGGGSVRIYDAEMQSAVFRIL----GINDEE 510

Query: 459 AMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504
           A       + AL++G PP AG   G+DR+VML+T   +IRDV+ FP
Sbjct: 511 AQEKFGFLLEALKYGTPPHAGLAFGLDRMVMLMTGASSIRDVMAFP 556