Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., lysyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  444 bits (1141), Expect = e-129
 Identities = 242/480 (50%), Positives = 321/480 (66%), Gaps = 23/480 (4%)

Query: 41  HPNSFRRDSLAGDLQKKFGEKSKEELEALNHVVSIAGRVMAKRG----PFLVIQETSGRI 96
           +PN F +      +  ++   + EELE ++   + AGR++++R      F  + + SGR+
Sbjct: 33  YPNGFVKQHDVAAISAEYEGLTAEELENVDTRFTCAGRIVSQRSFGKVTFFHLMDKSGRL 92

Query: 97  QAYASKEVQQELKDKYQG---LDIGDIIGVQGALHKSGKGDLYVNMEQFQLLTKALRPLP 153
           Q Y ++EV  E  D Y+    LDIGDI+GV G L ++  G+L ++ +Q  LLTK++RPLP
Sbjct: 93  QCYTAREVLGE--DPYRNFKKLDIGDIVGVSGTLFRTKTGELTLSCDQCILLTKSIRPLP 150

Query: 154 EKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVI 213
           EK+HGL D E RYRQRYVDLIV   +R  F  R+ ++   R F+  K FMEVETPMM  I
Sbjct: 151 EKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRTLIVREFRRFLEDKGFMEVETPMMQPI 210

Query: 214 PGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPE 273
           PGGA+A PFITHHNALDM +Y+RIAPELYLKRL+VGGF++VFEINRNFRNEG+S RHNPE
Sbjct: 211 PGGATAMPFITHHNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNEGISTRHNPE 270

Query: 274 FTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEF-GGKYARMSMFDAI 332
           FTM EFY AYA ++DLMDLTE+L + VA +V GS  + Y    V+   G++ R+S  D++
Sbjct: 271 FTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSYVVTYQGQEVDLTPGRWTRLSFHDSL 330

Query: 333 KH---YNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGETAEPKL 389
           +    + P          + I+ R   V       VD E      +L  ++F    E KL
Sbjct: 331 EKIGGHKPEFYNDYEAVRKYIRERGEKV-------VDGEKM---AKLQAKLFDLDVEGKL 380

Query: 390 MQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQV 449
           +QPTFI  YP DISPL+RR+++ P  TDRFE FI GRE+ N FSELND  DQ  RF  QV
Sbjct: 381 IQPTFIYHYPTDISPLSRRNNERPDVTDRFELFITGRELGNAFSELNDPVDQRMRFMDQV 440

Query: 450 EAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQ 509
             KE+GD EA F D DY+ ALE+G+PP AG+G+GIDRLVMLLT++ +IR+VILFP ++P+
Sbjct: 441 AEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVMLLTDSPSIREVILFPLLKPE 500