Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  830 bits (2144), Expect = 0.0
 Identities = 406/498 (81%), Positives = 453/498 (90%), Gaps = 1/498 (0%)

Query: 12  EQIAQEENKLIAERRSKLDHIRKNCKANGHPNSFRRDSLAGDLQKKFGEKSKEELEALNH 71
           EQ+ Q+ENKLIAERR+KLD IR NC AN HPN+FRR   A +LQ+K+G+ +KEELEAL  
Sbjct: 3   EQV-QDENKLIAERRAKLDSIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALGF 61

Query: 72  VVSIAGRVMAKRGPFLVIQETSGRIQAYASKEVQQELKDKYQGLDIGDIIGVQGALHKSG 131
             SIAGR+MAKRGPFLVIQ+ SGRIQAYA K VQ +LKD+YQGLDIGDIIGV G LH SG
Sbjct: 62  RTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKGVQADLKDRYQGLDIGDIIGVTGQLHLSG 121

Query: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191
           KGDLYVNME++QLLTKALRPLPEKFHGLTDQE RYRQRYVDLIVNE SR AF++RSKV++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVA 181

Query: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
           AIRNFMI K+FMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241

Query: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
           +RVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADY+DLMDLTEELLSS+A+E+LGS  MP
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQMP 301

Query: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
           YGEHTV+FGG YAR+SM +AI+ YNP++A IQA+T E +++ + M  +A S+ + +E FW
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFW 361

Query: 372 TCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANG 431
           TCGQLLEEIFGETAE +LMQPTFITGYPADISPLARR+DDN F TDRFEFFIGGREVANG
Sbjct: 362 TCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANG 421

Query: 432 FSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLL 491
           FSELNDA+DQD+RFKAQV+AK++GDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML 
Sbjct: 422 FSELNDAQDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLF 481

Query: 492 TNTHTIRDVILFPAMRPQ 509
           TNTHTIRDVILFPAMRPQ
Sbjct: 482 TNTHTIRDVILFPAMRPQ 499