Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., aspartyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 54/192 (28%), Positives = 103/192 (53%), Gaps = 11/192 (5%)

Query: 133 GDLYVNMEQFQLLTKALRPLPEKFHGLTD--QEMRYRQRYVDLIVNENSRNAFIVRSKVM 190
           G++ V + +++LL  +  P P      T+  + +R   RY+DL     +RN F++R +  
Sbjct: 113 GEIEVVVSEWKLLNTSKTP-PFLIEDRTEASENLRLAWRYLDLRRPRMARN-FMLRHRAA 170

Query: 191 SAIRNFMISKQFMEVETPMM-HVIPGGASARPFITHHNALDMPMYLRI--APELYLKRLV 247
            + R ++    F+E+ETP +    P GA  R F+   + L+  M+  +  +P+++ + L+
Sbjct: 171 QSARRYLDELDFLEIETPYLTKATPEGA--RDFLVP-SRLNHGMFYALPQSPQIFKQLLM 227

Query: 248 VGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLG- 306
           V G DR ++I R FR+E +      EFT ++  M++ D + +M + E L+S V  + LG 
Sbjct: 228 VSGMDRYYQIVRCFRDEDMRADRQLEFTQIDIEMSFVDEERVMSMAEGLMSRVMKDTLGV 287

Query: 307 STSMPYGEHTVE 318
             ++P+   T +
Sbjct: 288 DVTVPFPRMTYD 299



 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 419 FEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTA 478
           ++  + G E+  G   ++ AE Q   F A     +  +++  F     I ALEHG PP  
Sbjct: 491 YDMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFL----IQALEHGAPPHG 546

Query: 479 GQGIGIDRLVMLLTNTHTIRDVILFP 504
           G   G+DRLVMLLT + +IRDVI FP
Sbjct: 547 GIAFGMDRLVMLLTGSPSIRDVIAFP 572