Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., lysyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  456 bits (1174), Expect = e-133
 Identities = 244/513 (47%), Positives = 341/513 (66%), Gaps = 45/513 (8%)

Query: 24  ERRSKLDHIRKN-----CK-----ANGHPNSFRRDSLAGDLQKKFGEKSKEELEALNHVV 73
           E R +L+ + KN     C+      + +PN F +      +  ++     +ELE ++   
Sbjct: 32  EARDELNEVVKNRVVKTCELLDAGVSAYPNGFIKKHDIAPVLAEYEGLDADELETVDAAF 91

Query: 74  SIAGRVMAKRG----PFLVIQETSGRIQAYASKE-VQQELKDKYQGLDIGDIIGVQGALH 128
           ++AGR+++ R      F  I + +GR+Q YA++E + +E    ++ LDIGDI+GV G L 
Sbjct: 92  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGVSGRLF 151

Query: 129 KSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSK 188
           ++  G+L ++  + +LLTK++RPLPEK+HGL D E+RYRQRYVDLIV   +R+ F  R+ 
Sbjct: 152 RTKTGELTLSCTEVRLLTKSIRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTI 211

Query: 189 VMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVV 248
           ++   R F+ ++ FMEVETPMM  IPGGA+A+PF+T HNALDM +Y+RIAPELYLKRL+V
Sbjct: 212 IVREFRRFLEARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLYMRIAPELYLKRLLV 271

Query: 249 GGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308
           GGF++VFEINRNFRNEG+S +HNPEFTM EFY AYA ++DLMDLTEEL S +A EV GS+
Sbjct: 272 GGFEKVFEINRNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSS 331

Query: 309 SMPYGEHTVEF-GGKYARMSMFDAIK-----------HYNPNHAQIQALTEEDIQNRDLM 356
            + Y    V+   GK+ R++  ++++            Y    A ++   E+ +Q   L 
Sbjct: 332 VITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVRAYVRERGEKVLQGEKL- 390

Query: 357 VSIAKSVHVDVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFT 416
                            G+L  ++F    EP+L+QPTFI  YP DISPL+RR++ NP  T
Sbjct: 391 -----------------GKLQAKLFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVT 433

Query: 417 DRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPP 476
           DRFE FI GRE+AN FSELND  DQ  RF+ QV+ KE+GDDEA F D DY+ ALE+G+PP
Sbjct: 434 DRFELFITGRELANAFSELNDPVDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPP 493

Query: 477 TAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQ 509
            AGQG+GIDRLVMLLT++ +IR+VILFP ++P+
Sbjct: 494 AAGQGVGIDRLVMLLTDSPSIREVILFPLLKPE 526