Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., lysyl-tRNA synthetase, class II from Paraburkholderia bryophila 376MFSha3.1

 Score =  511 bits (1315), Expect = e-149
 Identities = 272/523 (52%), Positives = 360/523 (68%), Gaps = 24/523 (4%)

Query: 1   MTDAVQNEINQEQIAQ-------EENKLIAERRSKLDHIRKNCKANGHPNSFRRDSLAGD 53
           M + +Q    Q  +AQ       ++NK+IAERR KL  +R+   A  +PN FR    A D
Sbjct: 19  MNEPIQPNTAQPDVAQPSVVPEVDDNKIIAERREKLREVREQGIA--YPNDFRPTHHAED 76

Query: 54  LQKKFGEKSKEELEALNHVVSIAGRVMAKR----GPFLVIQETSGRIQAYASK-EVQQEL 108
           LQ +F    KE LEA    V+IAGR+M KR      F  +++ SG+IQ + +  +V Q+ 
Sbjct: 77  LQSQFEHTDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQQT 136

Query: 109 KDKYQGLDIGDIIGVQGALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQ 168
            D ++  D+GDI+  +G L ++ KG+L V   + +LL+K+LRPLP+KFHGL+DQEM+YRQ
Sbjct: 137 YDAFKKWDMGDIVAARGVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQ 196

Query: 169 RYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNA 228
           RYVDLIV   +R  F+ R+K +S+IR FM    FMEVETPM+H IPGGA+A+PF THHNA
Sbjct: 197 RYVDLIVTPETRKTFVARTKAISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNA 256

Query: 229 LDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKD 288
           LDM M+LRIAPELYLKRLVVGGF+RVFEINRNFRNEG+S RHNPEFTM+EFY AY DYK 
Sbjct: 257 LDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKW 316

Query: 289 LMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEE 348
           +MD TE+L+   A++ LG+ ++ Y    ++    + R+++  AI+ Y P +      T E
Sbjct: 317 VMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYAPQY------TNE 370

Query: 349 DIQNRDLMVSIAKSVHVDV-EPFWT---CGQLLEEIFGETAEPKLMQPTFITGYPADISP 404
            + +   + +  K   VD  +P +     G L   +F ETAE +L +PT+I  YP ++SP
Sbjct: 371 QLADSAFLRTELKKFGVDASQPQFLNAGVGSLQLALFEETAESQLWEPTYIIDYPIEVSP 430

Query: 405 LARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDA 464
           LAR SD     T+RFE FI GRE+ANGFSELND EDQ ARFK QV+ K++GD+EAMFYDA
Sbjct: 431 LARASDKVEGITERFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDA 490

Query: 465 DYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMR 507
           DYI ALE+G+PP  G GIGIDRLVM+LT++ +IRDVILFP +R
Sbjct: 491 DYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVILFPHLR 533