Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., lysyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  389 bits (998), Expect = e-112
 Identities = 201/457 (43%), Positives = 293/457 (64%), Gaps = 27/457 (5%)

Query: 73  VSIAGRVMAKR----GPFLVIQETSGRIQAYASKE--VQQELKDKYQG-----LDIGDII 121
           VS+AGR+M++R      F+ +Q++ GRIQ Y +++     E K+ Y       LD+GD +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFV 114

Query: 122 GVQGALHKSGKGDLYVNMEQFQLLTKALRPLP-------EKFHGLTDQEMRYRQRYVDLI 174
           G++G + ++  G++ ++ ++  +L K+++PLP         +    D E+RYRQRYVDL+
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVAYDSFEDPELRYRQRYVDLV 174

Query: 175 VNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY 234
           VNE  +  F  R+ V+  +RN +    + EVETP++  I GGASARPFITHHN+LD+ +Y
Sbjct: 175 VNEGIKETFEKRATVVRTLRNALDEAGYTEVETPILQSIAGGASARPFITHHNSLDIDLY 234

Query: 235 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTE 294
           LRIA ELYLKRL+VGGF+ V+EI +NFRNEG+   HNPEFT ME Y+ Y DY  +M  TE
Sbjct: 235 LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTE 294

Query: 295 ELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRD 354
           +LL  + + V GST       T+ F   Y R+ + DAIK        +   +EE+I+   
Sbjct: 295 KLLERICIAVNGSTETVVDGKTISFKAPYRRLPILDAIK--EKTGYDLNGKSEEEIR--- 349

Query: 355 LMVSIAKSVHV-DVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNP 413
               I K + + +++     G+L++EIFGE  E   +QPTFIT YP ++SPL +     P
Sbjct: 350 ---QICKELKMEEIDDTMGKGKLIDEIFGEFCEGSYIQPTFITDYPVEMSPLTKMHRSKP 406

Query: 414 FFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHG 473
             T+RFE  + G+E+AN +SELND  DQ+ RFK Q+   + GDDEAM  D D++ AL++G
Sbjct: 407 GLTERFELMVNGKELANAYSELNDPLDQEERFKEQMRLADKGDDEAMIIDQDFLRALQYG 466

Query: 474 LPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQQ 510
           +PPT+G GIGIDRLVML+T   TI++V+ FP MRP++
Sbjct: 467 MPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503