Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 57/197 (28%), Positives = 102/197 (51%), Gaps = 13/197 (6%)

Query: 133 GDLYVNMEQFQLLTKALRPLPEKFHGLTD--QEMRYRQRYVDLIVNENSRNAFIVRSKVM 190
           G++ V  ++  ++  +  PLP       +  +E R + RY+DL   E ++   + R+KV 
Sbjct: 90  GEIEVLGKELTIINSS-EPLPLSLDNYQNNSEEQRLKYRYLDLRRPEMAQR-LMFRAKVT 147

Query: 191 SAIRNFMISKQFMEVETPMM-HVIPGGASARPFITHHNALDMPMY-LRIAPELYLKRLVV 248
           SA+R F+ S  F+++ETP++    P GA  R ++          + L  +P+L+ + L++
Sbjct: 148 SAVRRFLDSNGFLDIETPILTKATPEGA--RDYLVPSRTYKGQFFALPQSPQLFKQLLMM 205

Query: 249 GGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLG-- 306
            GFDR ++I + FR+E L     PEFT ++   ++   + +M  TEE++  + LE+L   
Sbjct: 206 SGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMAKTEEMMRGLFLEMLNVD 265

Query: 307 ---STSMPYGEHTVEFG 320
                 M Y E    FG
Sbjct: 266 LGEFPRMTYNEAMRRFG 282



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 399 PADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDE 458
           P  ++P    ++     +D ++  + G E+  G   +++ E Q A F+      E   ++
Sbjct: 454 PRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEK 513

Query: 459 AMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504
             F     + AL +G PP AG   G+DR++ML+T   +IRDV+ FP
Sbjct: 514 FGFL----LEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFP 555