Pairwise Alignments

Query, 437 a.a., branched-chain amino acid transport system II carrier protein from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) from Shewanella amazonensis SB2B

 Score =  439 bits (1128), Expect = e-127
 Identities = 230/432 (53%), Positives = 301/432 (69%), Gaps = 16/432 (3%)

Query: 5   LKLADILALGFMLFAFFLGAGNIIFPPLAGQLAGENITPAMFGFLLTAVGLPLITIIAIA 64
           +  +D L+LGFM FAFFLGAGN+IFPP AG LAGEN+  AM GFL+TAVG+PL+ +IA+A
Sbjct: 6   MSFSDTLSLGFMTFAFFLGAGNLIFPPFAGMLAGENMPLAMMGFLVTAVGMPLVGLIAVA 65

Query: 65  VAGGSWEHLTKDLPVKASVLMAALILIVIGPAFAAPRTGLVAYEMAVKPFFAESTQSYLT 124
              G    +   LP  A+  +A  I I+IGPAFAAPRTGLVA+E+  KPF  + T + L 
Sbjct: 66  KTQG---RVMAYLPAVAATALAVAIYIIIGPAFAAPRTGLVAFEIGAKPFLGD-TSAVLA 121

Query: 125 L-----------FSVLFFAVAMFFSWSQGKLVDLIGKLLTPALFICLIILALGVFMNPQG 173
           L           F++ FFAV M  +   GKL+D +GK+LTP L + L+ LA+ V M P G
Sbjct: 122 LGSISLNVAQLIFTLGFFAVTMLLALFPGKLMDSVGKVLTPVLMVLLLSLAISVIMLPSG 181

Query: 174 EMIAAQGEYLSQPLTKGFLEGYNTMDTFASLMFGILIVDALRSKGITDRAATTRYLITSA 233
           +  A  G+Y S PL KG +EGYNTMDT ASLMFG+LI+D LR KG+   A  TR L+ +A
Sbjct: 182 DTSAPVGDYASSPLIKGVIEGYNTMDTLASLMFGMLIIDLLRKKGVDAPADQTRALVRAA 241

Query: 234 VIAAIGLALVYGSLFYLGATSSSVAAGANNGGAILSQYVQALFGSYGQLVLSVIVMLACL 293
            IAA GLA VY SLF+LGAT+  +A GA NGG IL++YV   FG+ G L+LS +V LACL
Sbjct: 242 FIAASGLAFVYISLFFLGATAGDIAQGAENGGQILTRYVDREFGTLGALLLSTVVSLACL 301

Query: 294 TTAVGLISACSDFFSK-HTSLSYKQWVVINGVACGVVANVGLAQLITLSIPVLFALYPVA 352
           TTAVGL+SACSD+F++    + Y+Q+V++  + C VVANVGL QLI++SIPVL ++YPV 
Sbjct: 302 TTAVGLVSACSDYFNELFPRIKYRQFVILFSIICAVVANVGLTQLISVSIPVLVSVYPVV 361

Query: 353 IALVALTFVRHKLPNPRVAYRAVLSVSLLVALLDAAKVAGFDVSAFSFLPFFEYGMGWLL 412
           IALVA+TF+   LPNP+V++R VL+V+LL   +D  K AG ++ + SF+P +  GM WLL
Sbjct: 362 IALVAVTFMTQYLPNPKVSHRLVLAVALLFGAIDGLKAAGVNMESLSFMPLYAEGMAWLL 421

Query: 413 PTCAAMICMFFI 424
           PT   M+   FI
Sbjct: 422 PTAVTMVICLFI 433