Pairwise Alignments

Query, 437 a.a., branched-chain amino acid transport system II carrier protein from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., branched-chain amino acid transport system II carrier protein from Bifidobacterium breve UCC2003

 Score =  256 bits (655), Expect = 8e-73
 Identities = 145/424 (34%), Positives = 235/424 (55%), Gaps = 24/424 (5%)

Query: 11  LALGFMLFAFFLGAGNIIFPPLAGQLAGENITPAMFGFLLTAVGLPLITIIAIAVAGGSW 70
           L + F  F+ F GAGN+IFPP  G  AG    PA  GF+++AVGLP++ ++A+  AGG +
Sbjct: 10  LVMTFTFFSMFFGAGNLIFPPFVGAQAGSATMPAAIGFIVSAVGLPILGVLAVTFAGG-F 68

Query: 71  EHLTKDLPVKASVLMAALILIVIGPAFAAPRTGLVAYEMAVKPFFAESTQSYLTL-FSVL 129
           + L   +  K ++ +   I++ IGP FA PRT   ++EM V PF   S      L +S++
Sbjct: 69  DKLAGRVSPKFALFLGVAIMLTIGPCFAIPRTATTSFEMMVAPFVPTSYDWLAQLIYSLV 128

Query: 130 FFAVAMFFSWSQGKLVDLIGKLLTPALFICLIILALGVFMNPQGEMIAAQGEYLSQPLTK 189
           FF++A  F+    KL  ++G+ + P L + + +L +   ++  G      G+Y +  + +
Sbjct: 129 FFSLAFLFAQHPEKLSKVLGRFMGPLLLVLIAVLFIACLVHGIGTPAKPMGDYSTNQIAR 188

Query: 190 GFLEGYNTMDTFASLMFGILIVDALRSKGITDRAATTRYLITSAVIAAIGLALVYGSLFY 249
           GFL+GY TMD  A+L FGI+I   +R++ + D +   +    + +   + L ++YG+L Y
Sbjct: 189 GFLDGYQTMDLLAALYFGIVISANIRAQQVDDESLVQKETAYAGLGTGVLLIVIYGALSY 248

Query: 250 LGATSSSVAA---GANNGGAILSQYVQALFGSYGQLVLSVIVMLACLTTAVGLISACSDF 306
           +G  S ++A+     + G  +L+    +LFG++G   L V+ ++ACL    GLI  C+ +
Sbjct: 249 VGVVSGAIASIDPAKDTGATVLTNLTSSLFGTFGTAFLGVVFVIACLNVCTGLICTCATY 308

Query: 307 FSKHT--------SLSYKQWVVINGVACGVVANVGLAQLITLSIPVLFALYPVAIALVAL 358
           F  HT        +LSY+ W +I  V   +V+N GL+ +I +S+PVL ALYP+AI LV L
Sbjct: 309 F--HTRFQTVAGRTLSYRTWQIIFTVFSFIVSNAGLSAIIKVSVPVLSALYPIAIVLVLL 366

Query: 359 TFVRHKLPN--PRVAYRAVLSV---SLLVALLDAAKVAGFDV----SAFSFLPFFEYGMG 409
                KL    PRV +  VL V   S    +   A V G  +    +A + LP  +Y +G
Sbjct: 367 ALTHKKLGARFPRVYFWTVLLVGIASFATCISSLAAVFGGSIGWLDAALAMLPLQQYQLG 426

Query: 410 WLLP 413
           W++P
Sbjct: 427 WVMP 430