Pairwise Alignments

Query, 240 a.a., tRNA (adenosine(37)-N6)-methyltransferase TrmM from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., methyltransferase small (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (431), Expect = 2e-47
 Identities = 107/243 (44%), Positives = 136/243 (55%), Gaps = 16/243 (6%)

Query: 11  FRFKQFSIEEGTCGMPISTDGVLLGSWAFSLSPTTILDIGCGTGLLSLMCAQRFPHAHIT 70
           F FKQF +++  CGMP+STDGVLLG+WA      TILDIG G+GLLSLM AQR   A I 
Sbjct: 3   FTFKQFHVDDSHCGMPVSTDGVLLGAWAPLTQAKTILDIGAGSGLLSLMAAQR-SEAVIQ 61

Query: 71  ALDIEQTAYLAAEHNRQQSPWAERIECQHADILHWQP------SKRFAAIICNPPYFNSG 124
           AL+I+  A    +HN  QSPW++RI    AD+L W P        +F  I+CNPPYF++G
Sbjct: 62  ALEIDPLAAQDCQHNIDQSPWSDRITLIQADLLQWYPLAQTQAQTQFDHILCNPPYFDNG 121

Query: 125 ETAQHQVRATARHTISLQHQALIERLPQLLEPDGVASFILPKAEGEDFIALARQAGLFVG 184
             +Q   RA ARHT SL    L+  + QLL P G AS ILP A    F+ L  +  L + 
Sbjct: 122 PQSQCSKRAQARHTDSLAFDQLLSAIKQLLAPTGKASLILPNASLGRFLPLLAEFKLKLS 181

Query: 185 RYCQVQPTTDK-PVHRLLFELHL------SPCLPVETRLVIREQQG-YSEAFCQLTRDFY 236
               +    +K P   LL   H       S  +  E  L IR+  G YS+A   LT+ FY
Sbjct: 182 ARVDITTAPNKAPQRHLLCLSHAVSSAESSEAIEAE-HLSIRDASGAYSQAMVALTQAFY 240

Query: 237 LKM 239
           LK+
Sbjct: 241 LKL 243